RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 PLGP00747 810 aaPredicted RBP11.53□□□□□ -0.56
VAMP1-201ENST00000361716 PRH1P02810 166 aa11.53□□□□□ -0.56
VAMP1-201ENST00000361716 OR13C7P0DN81 318 aa11.53□□□□□ -0.56
VAMP1-201ENST00000361716 NR2C1P13056 603 aa11.53□□□□□ -0.56
VAMP1-201ENST00000361716 ELAVL3Q14576 367 aaKnown RBP11.53□□□□□ -0.56
VAMP1-201ENST00000361716 ZNF674Q2M3X9 581 aa11.53□□□□□ -0.56
VAMP1-201ENST00000361716 C2orf76Q3KRA6 126 aa11.53□□□□□ -0.56
VAMP1-201ENST00000361716 RNASE10Q5GAN6 216 aaKnown RBP11.53□□□□□ -0.56
VAMP1-201ENST00000361716 PRSS58Q8IYP2 241 aa11.53□□□□□ -0.56
VAMP1-201ENST00000361716 TEX19Q8NA77 164 aa11.53□□□□□ -0.56
VAMP1-201ENST00000361716 TSACCQ96A04 125 aaPredicted RBP11.53□□□□□ -0.56
VAMP1-201ENST00000361716 CST11Q9H112 138 aa11.53□□□□□ -0.56
VAMP1-201ENST00000361716 IGFLR1Q9H665 355 aa11.53□□□□□ -0.56
VAMP1-201ENST00000361716 PHPT1Q9NRX4 125 aaPredicted RBP11.53□□□□□ -0.56
VAMP1-201ENST00000361716 DOCK9Q9BZ29 2069 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 MCIDASD6RGH6 385 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 C11orf98E9PRG8 122 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 OGG1O15527 345 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 CTAG2O75638 210 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 OLFM2O95897 454 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 RCC1P18754 421 aaPredicted RBP11.52□□□□□ -0.57
VAMP1-201ENST00000361716 Q499Y3 187 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 LCN10Q6JVE6 187 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 PRSS41Q7RTY9 318 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 DPPA2Q7Z7J5 298 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 AVL9Q8NBF6 648 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 OR13C9Q8NGT0 318 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 COMMD4Q9H0A8 199 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 PRSS16Q9NQE7 514 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 RCC2Q9P258 522 aaKnown RBP11.52□□□□□ -0.57
VAMP1-201ENST00000361716 TMED7Q9Y3B3 224 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 AP4M1O00189 453 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 VEGFDO43915 354 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 NME2P1O60361 137 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 CLEC3AO75596 197 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 OR8U8P0C7N1 319 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 MAP3K8P41279 467 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 TAS2R19P59542 299 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 PDGFRLQ15198 375 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 RSU1Q15404 277 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 DCST2Q5T1A1 773 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 MFSD12Q6NUT3 480 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 C15orf40Q8WUR7 153 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 LRRC3BQ96PB8 259 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 RAB33BQ9H082 229 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 MMP26Q9NRE1 261 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 RXFP3Q9NSD7 469 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 TRANK1O15050 2925 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 CABIN1Q9Y6J0 2220 aa11.52□□□□□ -0.57
VAMP1-201ENST00000361716 CDC40O60508 579 aaKnown RBP eCLIP11.51□□□□□ -0.57
VAMP1-201ENST00000361716 GLP1RP43220 463 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 ARHGAP11AQ6P4F7 1023 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 PAPD4Q6PIY7 484 aaKnown RBP11.51□□□□□ -0.57
VAMP1-201ENST00000361716 SLC35D2Q76EJ3 337 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 ZAR1Q86SH2 424 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 GVQW1Q8N7I0 195 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 OR4N2Q8NGD1 307 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 PPP1R14AQ96A00 147 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 FAM3DQ96BQ1 224 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 PIK3IP1Q96FE7 263 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 SDF2Q99470 211 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 EDEM2Q9BV94 578 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 TMPRSS5Q9H3S3 457 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 PELI2Q9HAT8 420 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.51□□□□□ -0.57
VAMP1-201ENST00000361716 ZNF223Q9UK11 482 aaPredicted RBP11.51□□□□□ -0.57
VAMP1-201ENST00000361716 A0A0A6YYD5 115 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 IGKV1-8A0A0C4DH67 115 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 C7orf77A4D0Y5 90 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 OTOL1A6NHN0 477 aaPredicted RBP11.51□□□□□ -0.57
VAMP1-201ENST00000361716 ZNF729A6NN14 1252 aaPredicted RBP11.51□□□□□ -0.57
VAMP1-201ENST00000361716 UBE2CO00762 179 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 B3GALT2O43825 422 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 SCGB1D2O95969 90 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 ERCC1P07992 297 aaPredicted RBP11.51□□□□□ -0.57
VAMP1-201ENST00000361716 PSMB6P28072 239 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 ACTBP60709 375 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 ACTG1P63261 375 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 MPPED2Q15777 294 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 RAB11BQ15907 218 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 NKAIN2Q5VXU1 208 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 DHRS11Q6UWP2 260 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 LRRC69Q6ZNQ3 347 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 NRSN1Q8IZ57 195 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 BHLHE23Q8NDY6 225 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 CCL4L1Q8NHW4 92 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 SMARCD2Q92925 531 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 CMBLQ96DG6 245 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 KIRREL1Q96J84 757 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 LAMP5Q9UJQ1 280 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 MUC3AQ02505 3323 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 C9JQL5 133 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 ADAP1O75689 374 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 TSPAN15O95858 294 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 RAB5AP20339 215 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 PRKAR1BP31321 381 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 MLF2Q15773 248 aaPredicted RBP11.51□□□□□ -0.57
VAMP1-201ENST00000361716 HNRNPA1L2Q32P51 320 aaKnown RBP11.51□□□□□ -0.57
VAMP1-201ENST00000361716 SLC22A6Q4U2R8 563 aa11.51□□□□□ -0.57
VAMP1-201ENST00000361716 C14orf28Q4W4Y0 310 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms