RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 PLPPR5Q32ZL2 321 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 LIN54Q6MZP7 749 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 PLXDC2Q6UX71 529 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 ETV3LQ6ZN32 361 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 SLC35D2Q76EJ3 337 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 NDUFAF7Q7L592 441 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 RPS19BP1Q86WX3 136 aaKnown RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 TIGD4Q8IY51 512 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 CLRN3Q8NCR9 226 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 OR52H1Q8NGJ2 320 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 LOXL4Q96JB6 756 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 C5orf34Q96MH7 638 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 TAAR9Q96RI9 348 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 DDOQ99489 341 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 ALG12Q9BV10 488 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 NUAK2Q9H093 628 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 RANBP3Q9H6Z4 567 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 NIPAL2Q9H841 368 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 ZNF275Q9NSD4 429 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 P4HTMQ9NXG6 502 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 GNG8Q9UK08 70 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 NXT1Q9UKK6 140 aaKnown RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 SSR3Q9UNL2 185 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 FARSAQ9Y285 508 aaKnown RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 SF3B6Q9Y3B4 125 aaKnown RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 PCDHGB2Q9Y5G2 931 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 IGKV1D-43A0A0B4J1Z2 117 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 A0A0X1KG70 313 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 ANKUB1A6NFN9 424 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 ANKRD61A6NGH8 418 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 METTL15A6NJ78 407 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 GABRPO00591 440 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 NUPL2O15504 423 aaKnown RBP4.56□□□□□ -1.68
ATXN3-202ENST00000359366 RAD1O60671 282 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 AHSA1O95433 338 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 PTBP3O95758 552 aaKnown RBP4.56□□□□□ -1.68
ATXN3-202ENST00000359366 WNT11O96014 354 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 HLA-DQA2P01906 255 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 GTF2E2P29084 291 aaKnown RBP4.56□□□□□ -1.68
ATXN3-202ENST00000359366 SDHAP31040 664 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 SSR4P51571 173 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 CARD18P57730 90 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 TAS2R60P59551 318 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 PUDPQ08623 228 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 TCF15Q12870 199 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 MYBPHQ13203 477 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 DNASE1L3Q13609 305 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 PON3Q15166 354 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 NTRK2Q16620 822 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 TMEM176BQ3YBM2 270 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-202ENST00000359366 ZNF404Q494X3 552 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 FAM69AQ5T7M9 428 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 LINC01590Q5TEZ4 76 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 CARD17Q5XLA6 110 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 TMEM81Q6P7N7 255 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 FJX1Q86VR8 437 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 SLC35F2Q8IXU6 374 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 MFSD4AQ8N468 514 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 FAM83FQ8NEG4 500 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-202ENST00000359366 SLC24A4Q8NFF2 622 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 OR2M3Q8NG83 312 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 OR4K17Q8NGC6 315 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 OR6Q1Q8NGQ2 317 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 OR5B2Q96R09 309 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 AMELYQ99218 206 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 CNN2Q99439 309 aaKnown RBP4.56□□□□□ -1.68
ATXN3-202ENST00000359366 PDCD1LG2Q9BQ51 273 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 HES7Q9BYE0 225 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 SAV1Q9H4B6 383 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-202ENST00000359366 FKRPQ9H9S5 495 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 PROK2Q9HC23 129 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 GSN-AS1Q9NRJ2 163 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 NUDT15Q9NV35 164 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 PLA2G3Q9NZ20 509 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 VSX1Q9NZR4 365 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-202ENST00000359366 SESN1Q9Y6P5 492 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 FREM1Q5H8C1 2179 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 NCOA6Q14686 2063 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-202ENST00000359366 IGF2RP11717 2491 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 A0A1B0GVC2 190 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 A6NIN4 97 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 KRBOX1C9JBD0 128 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 MS4A18H0YCH9 400 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 PLPP3O14495 311 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 SLC16A7O60669 478 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 UPK1BO75841 260 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 OR6A2O95222 327 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 DLGAP3O95886 979 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 RFPL3SP0C7P2 107 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 OR8G3PP0DMU2 310 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 PRF1P14222 555 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 IFNGR1P15260 489 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 CTLA4P16410 223 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 ZP3P21754 424 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 AZGP1P25311 298 aaKnown RBP4.56□□□□□ -1.68
ATXN3-202ENST00000359366 VEGFCP49767 419 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 DIO1P49895 249 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 AKR1D1P51857 326 aa4.56□□□□□ -1.68
ATXN3-202ENST00000359366 OR10A3P58181 314 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms