RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 GALP22466 123 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 ID4P47928 161 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 RIDAP52758 137 aaKnown RBP18.15■□□□□ 0.5
TRIM4-202ENST00000354241 HSPB2Q16082 182 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 TBR1Q16650 682 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 MCEMP1Q8IX19 187 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 TUSC5Q8IXB3 177 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 OR2AJ1Q8NGZ0 328 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 ABHD4Q8TB40 342 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 TBC1D15Q8TC07 691 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 EXTL1Q92935 676 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 ABHD17AQ96GS6 310 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 CALHM2Q9HA72 323 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 B3GAT2Q9NPZ5 323 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 PMF1-BGLAPU3KQ54 211 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 DVL2O14641 736 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 MRPL33O75394 65 aaKnown RBP18.15■□□□□ 0.5
TRIM4-202ENST00000354241 RPS19P39019 145 aaKnown RBP18.15■□□□□ 0.5
TRIM4-202ENST00000354241 TMPRSS3P57727 454 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 MXD1Q05195 221 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 ALKBH1Q13686 389 aaKnown RBP18.15■□□□□ 0.5
TRIM4-202ENST00000354241 KCNMB1Q16558 191 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 MS4A15Q8N5U1 240 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 SLIRPQ9GZT3 109 aaKnown RBP18.15■□□□□ 0.5
TRIM4-202ENST00000354241 KCNN2Q9H2S1 579 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 C1orf198Q9H425 327 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 SNTG1Q9NSN8 517 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 CENPMQ9NSP4 180 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 CCDC59Q9P031 241 aaKnown RBP18.15■□□□□ 0.5
TRIM4-202ENST00000354241 LRP12Q9Y561 859 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 LHFPL6Q9Y693 200 aa18.15■□□□□ 0.5
TRIM4-202ENST00000354241 A0A1B0GTH9 108 aa18.14■□□□□ 0.49
TRIM4-202ENST00000354241 AQP7O14520 342 aa18.14■□□□□ 0.49
TRIM4-202ENST00000354241 ZNHIT1O43257 154 aa18.14■□□□□ 0.49
TRIM4-202ENST00000354241 CD1AP06126 327 aa18.14■□□□□ 0.49
TRIM4-202ENST00000354241 MSR1P21757 451 aa18.14■□□□□ 0.49
TRIM4-202ENST00000354241 RNPS1Q15287 305 aaKnown RBP18.14■□□□□ 0.49
TRIM4-202ENST00000354241 RPS4Y2Q8TD47 263 aa18.14■□□□□ 0.49
TRIM4-202ENST00000354241 ZNF837Q96EG3 531 aaPredicted RBP18.14■□□□□ 0.49
TRIM4-202ENST00000354241 MAP6Q96JE9 813 aa18.14■□□□□ 0.49
TRIM4-202ENST00000354241 ALKBH3Q96Q83 286 aaPredicted RBP18.14■□□□□ 0.49
TRIM4-202ENST00000354241 NELFAQ9H3P2 528 aa18.14■□□□□ 0.49
TRIM4-202ENST00000354241 CRLF2Q9HC73 371 aa18.14■□□□□ 0.49
TRIM4-202ENST00000354241 B3GNT3Q9Y2A9 372 aa18.14■□□□□ 0.49
TRIM4-202ENST00000354241 A0A1B0GVC2 190 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 SERPINA3P01011 423 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 SDC2P34741 201 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 SOX6P35712 828 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 ACSM3Q53FZ2 586 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 FOXL2NBQ6ZUU3 175 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 CEACAM19Q7Z692 300 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 SIAH3Q8IW03 269 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 OR2G2Q8NGZ5 317 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 MCFD2Q8NI22 146 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 SLAMF6Q96DU3 332 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 PRDM14Q9GZV8 571 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 FRRS1LQ9P0K9 344 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 LUZP4Q9P127 313 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 ASH2LQ9UBL3 628 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 GDF2Q9UK05 429 aaPredicted RBP18.13■□□□□ 0.49
TRIM4-202ENST00000354241 TP53TG5Q9Y2B4 290 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 FRYQ5TBA9 3013 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 SLC22A20A6NK97 555 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 GPRIN2O60269 458 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 ADRB1P08588 477 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 H2BFMP0C1H6 154 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 CLEC2LP0C7M8 214 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 CFAP77Q6ZQR2 320 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 RNF133Q8WVZ7 376 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 TPK1Q9H3S4 243 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 BCO1Q9HAY6 547 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 SLC24A3Q9HC58 644 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 GTF2A1LQ9UNN4 478 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 LHX6Q9UPM6 363 aa18.13■□□□□ 0.49
TRIM4-202ENST00000354241 A0A087WV48 116 aa18.12■□□□□ 0.49
TRIM4-202ENST00000354241 ZNF724A8MTY0 619 aa18.12■□□□□ 0.49
TRIM4-202ENST00000354241 KRT33AO76009 404 aa18.12■□□□□ 0.49
TRIM4-202ENST00000354241 ZFPL1O95159 310 aa18.12■□□□□ 0.49
TRIM4-202ENST00000354241 TGM6O95932 706 aa18.12■□□□□ 0.49
TRIM4-202ENST00000354241 IL1AP01583 271 aa18.12■□□□□ 0.49
TRIM4-202ENST00000354241 PLEKHN1Q494U1 663 aaPredicted RBP18.12■□□□□ 0.49
TRIM4-202ENST00000354241 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.12■□□□□ 0.49
TRIM4-202ENST00000354241 LRRC18Q8N456 261 aa18.12■□□□□ 0.49
TRIM4-202ENST00000354241 OR5AK2Q8NH90 309 aa18.12■□□□□ 0.49
TRIM4-202ENST00000354241 NABP1Q96AH0 204 aa18.12■□□□□ 0.49
TRIM4-202ENST00000354241 ZNF416Q9BWM5 594 aa18.12■□□□□ 0.49
TRIM4-202ENST00000354241 RNF122Q9H9V4 155 aa18.12■□□□□ 0.49
TRIM4-202ENST00000354241 PARPBPQ9NWS1 579 aa18.12■□□□□ 0.49
TRIM4-202ENST00000354241 FBXL3Q9UKT7 428 aa18.12■□□□□ 0.49
TRIM4-202ENST00000354241 ZNF281Q9Y2X9 895 aa18.12■□□□□ 0.49
TRIM4-202ENST00000354241 SMIM30A4D0T7 59 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 CASKO14936 926 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 ZNF254O75437 659 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 IGHV3-9P01782 118 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 YES1P07947 543 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 UCNP55089 124 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 LSM6P62312 80 aaKnown RBP18.11■□□□□ 0.49
TRIM4-202ENST00000354241 ZNF404Q494X3 552 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 FAM27D1Q5T7N8 215 aa18.11■□□□□ 0.49
TRIM4-202ENST00000354241 LINGO2Q7L985 606 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms