RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 CACNA1CQ13936 2221 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 FTCDNL1E5RQL4 147 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 KHDRBS3O75525 346 aaKnown RBP13.45□□□□□ -0.26
TPM3-208ENST00000341485 OR6A2O95222 327 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 WNT11O96014 354 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 PNPP00491 289 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 COX6A1P12074 109 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 ANXA3P12429 323 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 HLA-DOBP13765 273 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 FBXW4P57775 412 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 EXT1Q16394 746 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 ZNF679Q8IYX0 411 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 OR11G2Q8NGC1 345 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 SLC22A8Q8TCC7 542 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 RNF128Q8TEB7 428 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 PPP1R14AQ96A00 147 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 ACTR6Q9GZN1 396 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 MRPL39Q9NYK5 338 aaKnown RBP13.45□□□□□ -0.26
TPM3-208ENST00000341485 NKIRAS2Q9NYR9 191 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 FOXJ2Q9P0K8 574 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 STEAP1Q9UHE8 339 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 A0A0C4DFX4 3053 aa13.45□□□□□ -0.26
TPM3-208ENST00000341485 A0A1W2PNU3 283 aaPredicted RBP13.44□□□□□ -0.26
TPM3-208ENST00000341485 ANKRD20A5PA0PJZ0 165 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 HPXP02790 462 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 SULT1A3P0DMM9 295 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 SULT1A4P0DMN0 295 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 NBL1P41271 181 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 AP3S2P59780 193 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 RPS18P62269 152 aaKnown RBP13.44□□□□□ -0.26
TPM3-208ENST00000341485 ELFN2Q5R3F8 820 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 OLFML2AQ68BL7 652 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 ZNF227Q86WZ6 799 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 MISPQ8IVT2 679 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 GLB1L2Q8IW92 636 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 KDM8Q8N371 416 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 TSEN15Q8WW01 171 aaKnown RBP13.44□□□□□ -0.26
TPM3-208ENST00000341485 MYOTQ9UBF9 498 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 TCFL5Q9UL49 500 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 ING4Q9UNL4 249 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 NSG1A0A0A6YYJ2 146 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 NAP1L6A6NFF2 107 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 ANKUB1A6NFN9 424 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 TMEM200CA6NKL6 621 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 OR2T1O43869 369 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 RAD1O60671 282 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 PEX14O75381 377 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 GLSO94925 669 aaPredicted RBP13.44□□□□□ -0.26
TPM3-208ENST00000341485 PSMB1P20618 241 aaKnown RBP13.44□□□□□ -0.26
TPM3-208ENST00000341485 OTX2P32243 289 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 BLVRAP53004 296 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 ADAM8P78325 824 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 MRPS10P82664 201 aaKnown RBP13.44□□□□□ -0.26
TPM3-208ENST00000341485 ROM1Q03395 351 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 MFGE8Q08431 387 aaPredicted RBP13.44□□□□□ -0.26
TPM3-208ENST00000341485 TEX30Q5JUR7 227 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 CREB3L2Q70SY1 520 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 MDGA2Q7Z553 956 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 FGD2Q7Z6J4 655 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 ESX1Q8N693 406 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 ELP5Q8TE02 316 aa13.44□□□□□ -0.26
TPM3-208ENST00000341485 DACT3Q96B18 629 aaPredicted RBP13.44□□□□□ -0.26
TPM3-208ENST00000341485 FARSAQ9Y285 508 aaKnown RBP13.44□□□□□ -0.26
TPM3-208ENST00000341485 MS4A18H0YCH9 400 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 ACOT7O00154 380 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 OR2J2O76002 312 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 NAGAP17050 411 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 HTR2BP41595 481 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 EIF2B1Q14232 305 aaKnown RBP13.43□□□□□ -0.26
TPM3-208ENST00000341485 MS4A18Q3C1V0 323 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 ASPHD2Q6ICH7 369 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 C5orf46Q6UWT4 87 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 DNM1P46Q6ZS02 220 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 NDUFAF7Q7L592 441 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 WDFY1Q8IWB7 410 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 OR11H4Q8NGC9 324 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 M1APQ8TC57 530 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 ZNF431Q8TF32 576 aaPredicted RBP13.43□□□□□ -0.26
TPM3-208ENST00000341485 TMEM234Q8WY98 164 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 HGDQ93099 445 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 ABHD6Q9BV23 337 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 OR10A4Q9H209 315 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 RANBP3Q9H6Z4 567 aaPredicted RBP13.43□□□□□ -0.26
TPM3-208ENST00000341485 MGAT4AQ9UM21 535 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 GTF2A1LQ9UNN4 478 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 COA3Q9Y2R0 106 aaPredicted RBP13.43□□□□□ -0.26
TPM3-208ENST00000341485 HRH3Q9Y5N1 445 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 FRYLO94915 3013 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 FREM3P0C091 2139 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 MEIKINA0A087WXM9 373 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 SPAARA0A1B0GVQ0 90 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 ERVH48-1M5A8F1 160 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 TNFSF15O95150 251 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 MPZL1O95297 269 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 FTH1P19P0C7X4 201 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 DCTDP32321 178 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 EFNB2P52799 333 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 SCAND1P57086 179 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 OR7E24Q6IFN5 339 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 FAAP20Q6NZ36 180 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms