RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 GPANK1O95872 356 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 CST2P09228 141 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 IFNA8P32881 189 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 MSX2P35548 267 aaPredicted RBP11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 RPL4P36578 427 aaKnown RBP11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 ZNF81P51508 661 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 MMP15P51511 669 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 PPP1CBP62140 327 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 ZBED5Q49AG3 693 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 GLYATQ6IB77 296 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 FAHD2BQ6P2I3 314 aaPredicted RBP11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 FOXL2NBQ6ZUU3 175 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 HDDC2Q7Z4H3 204 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 FAM156AQ8NDB6 213 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 ABHD4Q8TB40 342 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 SLC7A13Q8TCU3 470 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 SNX33Q8WV41 574 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 FAM162AQ96A26 154 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 TMEM186Q96B77 213 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 RASD2Q96D21 266 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 FAHD2AQ96GK7 314 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 FAM46AQ96IP4 442 aaKnown RBP11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 C4orf45Q96LM5 186 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 GPA33Q99795 319 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 OCEL1Q9H607 264 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 METTL17Q9H7H0 456 aaPredicted RBP11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 SMURF2Q9HAU4 748 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 MSL2Q9HCI7 577 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 POLE4Q9NR33 117 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 DECR2Q9NUI1 292 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 KLHL21Q9UJP4 597 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 ENPP4Q9Y6X5 453 aa11.36□□□□□ -0.59
NUDCD3-201ENST00000338427 TRBV4-1A0A0J9YWV2 114 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 SLC22A2O15244 555 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 PLPP2O43688 288 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 CCDC22O60826 627 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 CD14P08571 375 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 CTLA4P16410 223 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 ITGA2P17301 1181 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 GCH1P30793 250 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 NUDT2P50583 147 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 MRPS11P82912 194 aaKnown RBP11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 PSG7Q13046 419 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 SEC23BQ15437 767 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 TAF11Q15544 211 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 MESTQ5EB52 335 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 TMPRSS11FQ6ZWK6 438 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 FAM122BQ7Z309 247 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 GLCCI1Q86VQ1 547 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 RNF113BQ8IZP6 322 aaKnown RBP11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 OR52J3Q8NH60 311 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 GEMIN6Q8WXD5 167 aaKnown RBP11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 CCL17Q92583 94 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 KCTD14Q9BQ13 255 aaPredicted RBP11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 MYLK2Q9H1R3 596 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 ZNF665Q9H7R5 613 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 MRGBPQ9NV56 204 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 NKIRAS2Q9NYR9 191 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 STX18Q9P2W9 335 aaKnown RBP11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 GRHPRQ9UBQ7 328 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 GPR160Q9UJ42 338 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 METRNQ9UJH8 293 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 COA3Q9Y2R0 106 aaPredicted RBP11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 STARD10Q9Y365 291 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 WIPI2Q9Y4P8 454 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 IER3IP1Q9Y5U9 82 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 V9GYQ6 96 aa11.35□□□□□ -0.59
NUDCD3-201ENST00000338427 A6NIZ1 184 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 DEAF1O75398 565 aaPredicted RBP11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 MSMBP08118 114 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 MSR1P21757 451 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 CDKN2AP42771 156 aaKnown RBP11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 ERFP50548 548 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 FXYD6P3P58550 94 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 RAP1BP61224 184 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 RAP1AP62834 184 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 C1orf94Q6P1W5 598 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 PTCHD4Q6ZW05 846 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 RRM2BQ7LG56 351 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 ARPINQ7Z6K5 226 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 ALDH16A1Q8IZ83 802 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 C7orf34Q96L11 122 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 TSSK2Q96PF2 358 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 DCLRE1CQ96SD1 692 aaKnown RBP11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 FAM107BQ9H098 131 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 NDUFAF4Q9P032 175 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 AP3M1Q9Y2T2 418 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 GRIP1Q9Y3R0 1128 aa11.34□□□□□ -0.59
NUDCD3-201ENST00000338427 LOC105371242A0A075B767 164 aa11.33□□□□□ -0.6
NUDCD3-201ENST00000338427 TEX13CA0A0J9YWL9 993 aa11.33□□□□□ -0.6
NUDCD3-201ENST00000338427 PRSS37A4D1T9 235 aa11.33□□□□□ -0.6
NUDCD3-201ENST00000338427 HTR3EA5X5Y0 456 aa11.33□□□□□ -0.6
NUDCD3-201ENST00000338427 SOCS2O14508 198 aa11.33□□□□□ -0.6
NUDCD3-201ENST00000338427 TCF21O43680 179 aa11.33□□□□□ -0.6
NUDCD3-201ENST00000338427 SLC16A7O60669 478 aa11.33□□□□□ -0.6
NUDCD3-201ENST00000338427 UBOX5O94941 541 aa11.33□□□□□ -0.6
NUDCD3-201ENST00000338427 TFP02787 698 aa11.33□□□□□ -0.6
NUDCD3-201ENST00000338427 H1F0P07305 194 aaKnown RBP11.33□□□□□ -0.6
NUDCD3-201ENST00000338427 DBHP09172 617 aa11.33□□□□□ -0.6
NUDCD3-201ENST00000338427 GUCA1AP43080 201 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms