RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ATP6V1FQ16864 119 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 PIP5KL1Q5T9C9 394 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 ANKRD33Q7Z3H0 272 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 OR4F15Q8NGB8 312 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 ZNF649Q9BS31 505 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 CDH20Q9HBT6 801 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 GPR52Q9Y2T5 361 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 R4GMQ9 66 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 MEIKINA0A087WXM9 373 aa8.09□□□□□ -1.12
COL6A5-202ENST00000312481 MLLT10P55197 1068 aa8.09□□□□□ -1.12
COL6A5-202ENST00000312481 APCDD1Q8J025 514 aa8.09□□□□□ -1.12
COL6A5-202ENST00000312481 ZNF808Q8N4W9 903 aaPredicted RBP8.09□□□□□ -1.12
COL6A5-202ENST00000312481 MRPL43Q8N983 215 aaKnown RBP8.09□□□□□ -1.12
COL6A5-202ENST00000312481 PISDQ9UG56 409 aa8.09□□□□□ -1.12
COL6A5-202ENST00000312481 WNT6Q9Y6F9 365 aa8.09□□□□□ -1.12
COL6A5-202ENST00000312481 DENND4AQ7Z401 1863 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 FADS1O60427 444 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 IGHA2P01877 340 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 ZNF728P0DKX0 622 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 TUBG1P23258 451 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 P2RX3P56373 397 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 MGAT3Q09327 533 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 MTFR2Q6P444 385 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 NEURL2Q9BR09 285 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 GPR62Q9BZJ7 368 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 KCNK12Q9HB15 430 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 RHOFQ9HBH0 211 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 TUBG2Q9NRH3 451 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 MED16Q9Y2X0 877 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 FAM74A7A6NL05 159 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 DCTDP32321 178 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 CSNK1G2P78368 415 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 STK11Q15831 433 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 NAA40Q86UY6 237 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 OR4N5Q8IXE1 308 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 OPALINQ96PE5 141 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 USB1Q9BQ65 265 aaKnown RBP8.08□□□□□ -1.12
COL6A5-202ENST00000312481 TUBB1Q9H4B7 451 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 A0A087WUU8 490 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 A0A1W2PPV4 95 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 GLOD5A6NK44 160 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 HEPACAM2A8MVW5 462 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 CA11O75493 328 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 ACTL6BO94805 426 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 CST4P01036 141 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 CCL5P13501 91 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 FOSL2P15408 326 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 PCSK6P29122 969 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 P2RX1P51575 399 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 CASP6P55212 293 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 PITX1P78337 314 aaPredicted RBP8.08□□□□□ -1.12
COL6A5-202ENST00000312481 Q6ZNB5 142 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 GDPD3Q7L5L3 318 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 IQCF1Q8N6M8 205 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 OR52E1Q8NGJ3 308 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 CD99L2Q8TCZ2 262 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 ZMYND19Q96E35 227 aaPredicted RBP8.08□□□□□ -1.12
COL6A5-202ENST00000312481 SEC11CQ9BY50 192 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 PLPP1O14494 284 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 C1SP09871 688 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 PCMT1P22061 227 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 DPP4P27487 766 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 OR1D4P47884 311 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 POU3F4P49335 361 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 WNT7BP56706 349 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 ARF3P61204 181 aaPredicted RBP8.08□□□□□ -1.12
COL6A5-202ENST00000312481 ARF1P84077 181 aaKnown RBP8.08□□□□□ -1.12
COL6A5-202ENST00000312481 FZD2Q14332 565 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 TRAPPC6BQ86SZ2 158 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 ARHGDIGQ99819 225 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 GIMAP2Q9UG22 337 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 XKRY2A2RUG3 117 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 SCO2O43819 266 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 RPS25P62851 125 aaKnown RBP8.08□□□□□ -1.12
COL6A5-202ENST00000312481 RPS26P62854 115 aaKnown RBP8.08□□□□□ -1.12
COL6A5-202ENST00000312481 GABREP78334 506 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 IGFBP7Q16270 282 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 WDR73Q6P4I2 378 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 Q6ZTK2 550 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 GRASPQ7Z6J2 395 aaPredicted RBP8.08□□□□□ -1.12
COL6A5-202ENST00000312481 HAS2Q92819 552 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 CTDSP1Q9GZU7 261 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 GPR173Q9NS66 373 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 TMLHEQ9NVH6 421 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 ASH2LQ9UBL3 628 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 IGHA1P01876 353 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 SLC22A6Q4U2R8 563 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 RSPO2Q6UXX9 243 aaPredicted RBP8.08□□□□□ -1.12
COL6A5-202ENST00000312481 M1APQ8TC57 530 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 RAB40CQ96S21 281 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 WDR83Q9BRX9 315 aaKnown RBP8.08□□□□□ -1.12
COL6A5-202ENST00000312481 IFT22Q9H7X7 185 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 CXorf36Q9H7Y0 433 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 CHST11Q9NPF2 352 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 MPIG6BO95866 241 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 OPN1MWP04001 364 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 OPN1MW2P0DN77 364 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 OPN1MW3P0DN78 364 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 MMP11P24347 488 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 ABHD17BQ5VST6 288 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms