RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 SLC25A6P12236 298 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 CEBPBP17676 345 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 H3F3AP84243 136 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 NXNL2Q5VZ03 156 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 DHRS7BQ6IAN0 325 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-201ENST00000302528 DRAM2Q6UX65 266 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 C1QTNF6Q9BXI9 259 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 BANF2Q9H503 90 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 ZNF785A8K8V0 405 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 IGHV3-9P01782 118 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 DPY19L2P2Q6ZN68 376 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 Q6ZPB1 254 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-201ENST00000302528 MED25Q71SY5 747 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 ZNF296Q8WUU4 475 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-201ENST00000302528 BLNKQ8WV28 456 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 MOB3AQ96BX8 217 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 FYTTD1Q96QD9 318 aaKnown RBP9.55□□□□□ -0.88
CLIP1-201ENST00000302528 ANKRD10Q9NXR5 420 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 PADI1Q9ULC6 663 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 NDRG4Q9ULP0 352 aaKnown RBP9.55□□□□□ -0.88
CLIP1-201ENST00000302528 C4AP0C0L4 1744 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 C4BP0C0L5 1744 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 WDR1O75083 606 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 ATP1B1P05026 303 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 CHRM2P08172 466 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 CYB561P49447 251 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 RANP62826 216 aaKnown RBP9.54□□□□□ -0.88
CLIP1-201ENST00000302528 TMEM97Q5BJF2 176 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 SYT6Q5T7P8 510 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-201ENST00000302528 ZFP62Q8NB50 900 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-201ENST00000302528 GPR173Q9NS66 373 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 UNCXA6NJT0 531 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 GPR37O15354 613 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 CRYBA1P05813 215 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 RFC3P40938 356 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 TCEAL1Q15170 157 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 PXDC1Q5TGL8 231 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 TMEM64Q6YI46 380 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 CDH26Q8IXH8 852 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 KLHDC8BQ8IXV7 354 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 GPR32P1Q8NGA4 272 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 ST8SIA2Q92186 375 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 CABLES2Q9BTV7 478 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 CREBZFQ9NS37 354 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 POLDIP2Q9Y2S7 368 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 TAAR5O14804 337 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 SMAD6O43541 496 aaKnown RBP9.54□□□□□ -0.88
CLIP1-201ENST00000302528 HSBP1O75506 76 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 BMI1P35226 326 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 FOXK2Q01167 660 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 PRDX1Q06830 199 aaKnown RBP9.54□□□□□ -0.88
CLIP1-201ENST00000302528 DGAT2L6Q6ZPD8 337 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 CLDN22Q8N7P3 220 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 ATOH1Q92858 354 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-201ENST00000302528 ADIPOR1Q96A54 375 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 SLC35A4Q96G79 324 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 C10orf90Q96M02 699 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 DLL4Q9NR61 685 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 ZNF629Q9UEG4 869 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-201ENST00000302528 CSAG2Q9Y5P2 127 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 FLVCR1Q9Y5Y0 555 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 LAMB4A4D0S4 1761 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 ZNF320A2RRD8 509 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 F5H697 171 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 SIRPB1O00241 398 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 PRRG2O14669 202 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 SSSCA1O60232 199 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 JTBO76095 146 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 MBP02144 154 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 SCG5P05408 212 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 RD3LP0DJH9 198 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 SULT1A3P0DMM9 295 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 SULT1A4P0DMN0 295 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 OR5H8P0DN80 308 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 RAB5AP20339 215 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 CCR7P32248 378 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 OR2B8PP59922 312 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 CLEC12BQ2HXU8 276 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 ZNF787Q6DD87 383 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 ZNF534Q76KX8 674 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 WDTC1Q8N5D0 677 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 OR51S1Q8NGJ8 323 aa9.54□□□□□ -0.88
CLIP1-201ENST00000302528 CGGBP1Q9UFW8 167 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-201ENST00000302528 MEIKINA0A087WXM9 373 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 A0A0B4J203 849 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 TRABD2BA6NFA1 517 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 AREGP15514 252 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 BMP5P22003 454 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 CNN1P51911 297 aaKnown RBP9.53□□□□□ -0.88
CLIP1-201ENST00000302528 SLC39A5Q6ZMH5 540 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLIP1-201ENST00000302528 GRINAQ7Z429 371 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 TUSC5Q8IXB3 177 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 RPL3LQ92901 407 aaKnown RBP9.53□□□□□ -0.88
CLIP1-201ENST00000302528 CMBLQ96DG6 245 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 SLC22A12Q96S37 553 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 SMIM7Q9BQ49 75 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 STRAPQ9Y3F4 350 aaKnown RBP9.53□□□□□ -0.88
CLIP1-201ENST00000302528 MYH7P12883 1935 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 COX5AP20674 150 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms