RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 HLA-DQB1P01920 261 aa13□□□□□ -0.33
SMG8-201ENST00000300917 CLDN17P56750 224 aa13□□□□□ -0.33
SMG8-201ENST00000300917 GALK2Q01415 458 aa13□□□□□ -0.33
SMG8-201ENST00000300917 ANGPT1Q15389 498 aa13□□□□□ -0.33
SMG8-201ENST00000300917 SF3B4Q15427 424 aaKnown RBP eCLIP13□□□□□ -0.33
SMG8-201ENST00000300917 UBE2NLQ5JXB2 153 aa13□□□□□ -0.33
SMG8-201ENST00000300917 NCCRP1Q6ZVX7 275 aaPredicted RBP13□□□□□ -0.33
SMG8-201ENST00000300917 ZC3HAV1Q7Z2W4 902 aaKnown RBP13□□□□□ -0.33
SMG8-201ENST00000300917 LRRTM1Q86UE6 522 aa13□□□□□ -0.33
SMG8-201ENST00000300917 NKD1Q969G9 470 aa13□□□□□ -0.33
SMG8-201ENST00000300917 WDR54Q9H977 334 aa13□□□□□ -0.33
SMG8-201ENST00000300917 ZMAT3Q9HA38 289 aaKnown RBP13□□□□□ -0.33
SMG8-201ENST00000300917 DKKL1Q9UK85 242 aa13□□□□□ -0.33
SMG8-201ENST00000300917 MRPS18BQ9Y676 258 aaKnown RBP13□□□□□ -0.33
SMG8-201ENST00000300917 CPAMD8Q8IZJ3 1885 aa13□□□□□ -0.33
SMG8-201ENST00000300917 CFAP47Q6ZTR5 3102 aa13□□□□□ -0.33
SMG8-201ENST00000300917 SPTBN2O15020 2390 aa13□□□□□ -0.33
SMG8-201ENST00000300917 KHDRBS3O75525 346 aaKnown RBP13□□□□□ -0.33
SMG8-201ENST00000300917 SUMO3P55854 103 aaPredicted RBP13□□□□□ -0.33
SMG8-201ENST00000300917 RASGEF1BQ0VAM2 473 aa13□□□□□ -0.33
SMG8-201ENST00000300917 RNF128Q8TEB7 428 aa13□□□□□ -0.33
SMG8-201ENST00000300917 AKAP7Q9P0M2 348 aaPredicted RBP13□□□□□ -0.33
SMG8-201ENST00000300917 FLVCR2Q9UPI3 526 aa13□□□□□ -0.33
SMG8-201ENST00000300917 COL5A1P20908 1838 aaPredicted RBP12.99□□□□□ -0.33
SMG8-201ENST00000300917 TRBV5-5A0A0J9YX44 114 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 ZNF254O75437 659 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 ITGA5P08648 1049 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 FAM157BP0CG42 384 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 ARSBP15848 533 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 MAPK3P27361 379 aaPredicted RBP12.99□□□□□ -0.33
SMG8-201ENST00000300917 PEAR1Q5VY43 1037 aaPredicted RBP12.99□□□□□ -0.33
SMG8-201ENST00000300917 OPN5Q6U736 354 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 DND1Q8IYX4 353 aaKnown RBP12.99□□□□□ -0.33
SMG8-201ENST00000300917 JAGN1Q8N5M9 183 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 OR13C3Q8NGS6 347 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 PHF21AQ96BD5 680 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 SLC25A44Q96H78 314 aaPredicted RBP12.99□□□□□ -0.33
SMG8-201ENST00000300917 CACNG6Q9BXT2 260 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 B3GALT5Q9Y2C3 310 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 DMXL1Q9Y485 3027 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 A6NIZ1 184 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 ZNF208O43345 1280 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 ORC5O43913 435 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 TRAPPC6AO75865 159 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 WDPCPO95876 746 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 ANOS1P23352 680 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 BTCP35070 178 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 HOXD12P35452 270 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 GNALP38405 381 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 RAP1BP61224 184 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 RAP1AP62834 184 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 SNTB2Q13425 540 aaKnown RBP12.99□□□□□ -0.33
SMG8-201ENST00000300917 MFSD13AQ14CX5 517 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 TMEM255AQ5JRV8 349 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 SLC22A10Q63ZE4 541 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 ASPHD2Q6ICH7 369 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 PLXDC2Q6UX71 529 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 IQCF2Q8IXL9 164 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 CT55Q8WUE5 264 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 S100A16Q96FQ6 103 aaKnown RBP12.99□□□□□ -0.33
SMG8-201ENST00000300917 SPACA5Q96QH8 159 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 SOX7Q9BT81 388 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 ASH2LQ9UBL3 628 aa12.99□□□□□ -0.33
SMG8-201ENST00000300917 LOC107986453A0A1B0GWG9 222 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 HMX3A6NHT5 357 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 GPR171O14626 319 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 GMDSO60547 372 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 ENPP1P22413 925 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 MSX1P28360 303 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 STARP49675 285 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 Q0VFX4 171 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 MRPL28Q13084 256 aaKnown RBP12.98□□□□□ -0.33
SMG8-201ENST00000300917 SGCAQ16586 387 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 C5orf46Q6UWT4 87 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 DHRS13Q6UX07 377 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 ESX1Q8N693 406 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 OR1J4Q8NGS1 313 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 RPS4Y2Q8TD47 263 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 CDV3Q9UKY7 258 aaKnown RBP12.98□□□□□ -0.33
SMG8-201ENST00000300917 OR2M5A3KFT3 312 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 ZNF726A6NNF4 738 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 CENPXA8MT69 81 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 PHYHO14832 338 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 RER1O15258 196 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 ART1P52961 327 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 CLDN20P56880 219 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 GUCA2AQ02747 115 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 RIN1Q13671 783 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 DNM1P34Q6PK57 102 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 CFAP77Q6ZQR2 320 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 ASB17Q8WXJ9 295 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 ADAMTS14Q8WXS8 1223 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 RNF170Q96K19 258 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 ZNF700Q9H0M5 742 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 PAQR5Q9NXK6 330 aaPredicted RBP12.98□□□□□ -0.33
SMG8-201ENST00000300917 OR52A1Q9UKL2 312 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 TCFL5Q9UL49 500 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 CAMK2AQ9UQM7 478 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 MAP1BP46821 2468 aaKnown RBP12.98□□□□□ -0.33
SMG8-201ENST00000300917 TNRC6BQ9UPQ9 1833 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms