RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 C11orf71Q6IPW1 123 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 ACSM5Q6NUN0 579 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 ZNF774Q6NX45 483 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 DNM1P34Q6PK57 102 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 KRTAP1-3Q8IUG1 177 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 SLC37A3Q8NCC5 494 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 NUP37Q8NFH4 326 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 IL17RDQ8NFM7 739 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 OR9Q1Q8NGQ5 310 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 ZNRF4Q8WWF5 429 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 NRBF2Q96F24 287 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 SNX18Q96RF0 628 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 BDH2Q9BUT1 245 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 RACGAP1Q9H0H5 632 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 OR51B6Q9H340 312 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 CXorf56Q9H5V9 222 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 CBLN4Q9NTU7 201 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 KIF17Q9P2E2 1029 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 FBXL3Q9UKT7 428 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 RTTNQ86VV8 2226 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 IQCMA0A1B0GVH7 501 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 H3BNX3 289 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 OVOL3O00110 214 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 MITFO75030 526 aaPredicted RBP11.54□□□□□ -0.56
VPS28-201ENST00000292510 NDUFS7O75251 213 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 GYPBP06028 91 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 OR4A8P0C604 315 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 FAM157BP0CG42 384 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 FCGR1AP12314 374 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 OSMP13725 252 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 ZNF23P17027 643 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 CCNOP22674 350 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 PYCR1P32322 319 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 APLNRP35414 380 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 GINS1Q14691 196 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 ADIPOQQ15848 244 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 MST1LQ2TV78 715 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 FAHD1Q6P587 224 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 LYPD4Q6UWN0 246 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 ZBTB46Q86UZ6 589 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 OR51L1Q8NGJ5 315 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 PKP2Q99959 881 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 CACNG6Q9BXT2 260 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 CDH20Q9HBT6 801 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 ASH2LQ9UBL3 628 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 KLHL21Q9UJP4 597 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 BAIAP2Q9UQB8 552 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 TIMM10BQ9Y5J6 103 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 FKBP7Q9Y680 259 aa11.54□□□□□ -0.56
VPS28-201ENST00000292510 LOC100509620A0A075B734 347 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 C12orf71A8MTZ7 269 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 G3V2T6 193 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 TFP02787 698 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 CLUP10909 449 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 STOMP27105 288 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 GRK5P34947 590 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 SERPINF1P36955 418 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 ATP5J2P56134 94 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 PCBD1P61457 104 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 GALK2Q01415 458 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 TBC1D28Q2M2D7 210 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 TMEM236Q5W0B7 351 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 SLC27A4Q6P1M0 643 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 YTHDF3Q7Z739 585 aaKnown RBP11.53□□□□□ -0.56
VPS28-201ENST00000292510 HIPK1Q86Z02 1210 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 ZDHHC13Q8IUH4 622 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 LRRC75A-AS1Q8N1F1 130 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 ICA1LQ8NDH6 482 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 WFDC11Q8NEX6 87 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 PROKR2Q8NFJ6 384 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 SLC26A10Q8NG04 563 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 POM121L2Q96KW2 1035 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 RAB3IPQ96QF0 476 aaPredicted RBP11.53□□□□□ -0.56
VPS28-201ENST00000292510 RBM4Q9BWF3 364 aaKnown RBP11.53□□□□□ -0.56
VPS28-201ENST00000292510 GSX2Q9BZM3 304 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 C1orf198Q9H425 327 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 ZNF442Q9H7R0 627 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 MED20Q9H944 212 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 PAPOLBQ9NRJ5 636 aaKnown RBP11.53□□□□□ -0.56
VPS28-201ENST00000292510 ZNF701Q9NV72 531 aaPredicted RBP11.53□□□□□ -0.56
VPS28-201ENST00000292510 GDF2Q9UK05 429 aaPredicted RBP11.53□□□□□ -0.56
VPS28-201ENST00000292510 FZR1Q9UM11 496 aa11.53□□□□□ -0.56
VPS28-201ENST00000292510 F8P00451 2351 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 C5orf49A4QMS7 147 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 TVP23AA6NH52 213 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 SAC3D1A6NKF1 404 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 FAM183AA6NL82 134 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 RIIAD1A6NNX1 92 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 TMCC2O75069 709 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 SNAP29O95721 258 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 PTHP01270 115 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 IFNGP01579 166 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 HLA-DQA2P01906 255 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 PAX1P15863 534 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 ZNF3P17036 446 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 WNT5AP41221 380 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 GDI2P50395 445 aaKnown RBP11.52□□□□□ -0.57
VPS28-201ENST00000292510 ERVS71-1P61550 626 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 LSM6P62312 80 aaKnown RBP11.52□□□□□ -0.57
VPS28-201ENST00000292510 ADAM8P78325 824 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms