RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 C10orf128Q5T292 105 aa19.58■□□□□ 0.72
CCDC7-201ENST00000277657 RNF133Q8WVZ7 376 aa19.58■□□□□ 0.72
CCDC7-201ENST00000277657 CPNE4Q96A23 557 aaPredicted RBP19.58■□□□□ 0.72
CCDC7-201ENST00000277657 UGT2A1Q9Y4X1 527 aa19.58■□□□□ 0.72
CCDC7-201ENST00000277657 TRBV5-5A0A0J9YX44 114 aa19.57■□□□□ 0.72
CCDC7-201ENST00000277657 A0A1W2PPK0 400 aa19.57■□□□□ 0.72
CCDC7-201ENST00000277657 PIN1P1O15428 100 aa19.57■□□□□ 0.72
CCDC7-201ENST00000277657 SRSF10O75494 262 aaKnown RBP19.57■□□□□ 0.72
CCDC7-201ENST00000277657 PLGLB1Q02325 96 aa19.57■□□□□ 0.72
CCDC7-201ENST00000277657 CDC20Q12834 499 aa19.57■□□□□ 0.72
CCDC7-201ENST00000277657 PDSS1Q5T2R2 415 aa19.57■□□□□ 0.72
CCDC7-201ENST00000277657 OR7E24Q6IFN5 339 aa19.57■□□□□ 0.72
CCDC7-201ENST00000277657 SPATC1Q76KD6 591 aa19.57■□□□□ 0.72
CCDC7-201ENST00000277657 INTS12Q96CB8 462 aaKnown RBP19.57■□□□□ 0.72
CCDC7-201ENST00000277657 DERL3Q96Q80 235 aa19.57■□□□□ 0.72
CCDC7-201ENST00000277657 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.57■□□□□ 0.72
CCDC7-201ENST00000277657 TIGARQ9NQ88 270 aa19.57■□□□□ 0.72
CCDC7-201ENST00000277657 FOXD3Q9UJU5 478 aaPredicted RBP19.57■□□□□ 0.72
CCDC7-201ENST00000277657 PNPP00491 289 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 ZNF12P17014 697 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 Q499Y3 187 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 HSD17B12Q53GQ0 312 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 CORO6Q6QEF8 472 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 ACOT12Q8WYK0 555 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 COMMD4Q9H0A8 199 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 SEC61A2Q9H9S3 476 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 NOX4Q9NPH5 578 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 FLVCR1Q9Y5Y0 555 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 LHFPL6Q9Y693 200 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 V9GYH0 126 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 ZNF891A8MT65 544 aaPredicted RBP19.56■□□□□ 0.72
CCDC7-201ENST00000277657 LOC110117498-PIK3R3F6TDL0 507 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 RAB3BP20337 219 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 CDAP32320 146 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 SELENOPP49908 381 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 TNFSF10P50591 281 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 CCL11P51671 97 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 CLDN18P56856 261 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 OR10A3P58181 314 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 PPIAP62937 165 aaKnown RBP19.56■□□□□ 0.72
CCDC7-201ENST00000277657 ZNF766Q5HY98 468 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 CEP78Q5JTW2 689 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 PHYHD1Q5SRE7 291 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 SFXN4Q6P4A7 337 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 IGFL2Q6UWQ7 119 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 SNX29P2Q8IUI4 249 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 FDCSPQ8NFU4 85 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 OR6N1Q8NGY5 312 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 ROBO4Q8WZ75 1007 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 KCTD12Q96CX2 325 aaKnown RBP19.56■□□□□ 0.72
CCDC7-201ENST00000277657 SLC6A15Q9H2J7 730 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 ZCCHC4Q9H5U6 513 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 RCE1Q9Y256 329 aa19.56■□□□□ 0.72
CCDC7-201ENST00000277657 ACOD1A6NK06 481 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 CYTIPO60759 359 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 UPK1BO75841 260 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 ZNF708P17019 499 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 THBS2P35442 1172 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 PPP3R1P63098 170 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 FOXL2NBQ6ZUU3 175 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.55■□□□□ 0.72
CCDC7-201ENST00000277657 CATSPERDQ86XM0 798 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 C20orf196Q8IYI0 205 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 ZNF676Q8N7Q3 588 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 IL17RDQ8NFM7 739 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 PNPLA2Q96AD5 504 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 C1orf198Q9H425 327 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 EMC7Q9NPA0 242 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 ACKR4Q9NPB9 350 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 POLE4Q9NR33 117 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 COMMD3Q9UBI1 195 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 R4GMQ9 66 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 ZFHX4Q86UP3 3567 aa19.55■□□□□ 0.72
CCDC7-201ENST00000277657 GPR171O14626 319 aa19.54■□□□□ 0.72
CCDC7-201ENST00000277657 SRMP19623 302 aa19.54■□□□□ 0.72
CCDC7-201ENST00000277657 MAPK3P27361 379 aaPredicted RBP19.54■□□□□ 0.72
CCDC7-201ENST00000277657 MAGEB1P43366 347 aa19.54■□□□□ 0.72
CCDC7-201ENST00000277657 MFGE8Q08431 387 aaPredicted RBP19.54■□□□□ 0.72
CCDC7-201ENST00000277657 MZT2AQ6P582 158 aa19.54■□□□□ 0.72
CCDC7-201ENST00000277657 SLC22A16Q86VW1 577 aa19.54■□□□□ 0.72
CCDC7-201ENST00000277657 TMEM178AQ8NBL3 297 aa19.54■□□□□ 0.72
CCDC7-201ENST00000277657 OR10S1Q8NGN2 331 aa19.54■□□□□ 0.72
CCDC7-201ENST00000277657 ZNF845Q96IR2 970 aaPredicted RBP19.54■□□□□ 0.72
CCDC7-201ENST00000277657 SH3GL3Q99963 347 aa19.54■□□□□ 0.72
CCDC7-201ENST00000277657 ARPC4-TTLL3A0A0A6YYG9 625 aa19.54■□□□□ 0.72
CCDC7-201ENST00000277657 ZNF544Q6NX49 715 aa19.54■□□□□ 0.72
CCDC7-201ENST00000277657 GPR148Q8TDV2 347 aa19.54■□□□□ 0.72
CCDC7-201ENST00000277657 SLAMF6Q96DU3 332 aa19.54■□□□□ 0.72
CCDC7-201ENST00000277657 SDHCQ99643 169 aaPredicted RBP19.54■□□□□ 0.72
CCDC7-201ENST00000277657 GDF2Q9UK05 429 aaPredicted RBP19.54■□□□□ 0.72
CCDC7-201ENST00000277657 FBXL3Q9UKT7 428 aa19.54■□□□□ 0.72
CCDC7-201ENST00000277657 CDV3Q9UKY7 258 aaKnown RBP19.54■□□□□ 0.72
CCDC7-201ENST00000277657 OCM2P0CE71 109 aa19.53■□□□□ 0.72
CCDC7-201ENST00000277657 DCTDP32321 178 aa19.53■□□□□ 0.72
CCDC7-201ENST00000277657 NTF4P34130 210 aa19.53■□□□□ 0.72
CCDC7-201ENST00000277657 BCL2A1Q16548 175 aa19.53■□□□□ 0.72
CCDC7-201ENST00000277657 ZNF181Q2M3W8 571 aa19.53■□□□□ 0.72
CCDC7-201ENST00000277657 RGS21Q2M5E4 152 aa19.53■□□□□ 0.72
CCDC7-201ENST00000277657 IDNKQ5T6J7 187 aa19.53■□□□□ 0.72
CCDC7-201ENST00000277657 RHOUQ7L0Q8 258 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms