RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 YIPF5Q969M3 257 aa20.6■□□□□ 0.89
RAB40B-201ENST00000269347 ZFP3Q96NJ6 502 aa20.6■□□□□ 0.89
RAB40B-201ENST00000269347 AUNIPQ9H7T9 357 aa20.6■□□□□ 0.89
RAB40B-201ENST00000269347 NEK6Q9HC98 313 aa20.6■□□□□ 0.89
RAB40B-201ENST00000269347 AKAP7Q9P0M2 348 aaPredicted RBP20.6■□□□□ 0.89
RAB40B-201ENST00000269347 OTOGLQ3ZCN5 2332 aa20.6■□□□□ 0.89
RAB40B-201ENST00000269347 A8MV72 311 aaPredicted RBP20.59■□□□□ 0.89
RAB40B-201ENST00000269347 SULT2B1O00204 365 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 GPR171O14626 319 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 KHDRBS3O75525 346 aaKnown RBP20.59■□□□□ 0.89
RAB40B-201ENST00000269347 ADH6P28332 368 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 GPR176Q14439 515 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 ATAD3CQ5T2N8 411 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 RAET1LQ5VY80 246 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 ZNF57Q68EA5 555 aaPredicted RBP20.59■□□□□ 0.89
RAB40B-201ENST00000269347 TMPPEQ6ZT21 453 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 BIVMQ86UB2 503 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 GPR148Q8TDV2 347 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 ZBTB8AQ96BR9 441 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.59■□□□□ 0.897e-9■■■■□ 20
RAB40B-201ENST00000269347 HDHD2Q9H0R4 259 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 RBFOX1Q9NWB1 397 aaKnown RBP20.59■□□□□ 0.89
RAB40B-201ENST00000269347 CFAP47Q6ZTR5 3102 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 PINLYPA6NC86 204 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 AQP7P3A6NL99 342 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 BLVRAP53004 296 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 H3F3AP84243 136 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 CHAF1BQ13112 559 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 PHYHD1Q5SRE7 291 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 TMEM225Q6GV28 225 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 GLB1L2Q8IW92 636 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 STRADBQ9C0K7 418 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 COMMD4Q9H0A8 199 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 TCF7L1Q9HCS4 588 aa20.59■□□□□ 0.89
RAB40B-201ENST00000269347 ZNF823P16415 610 aa20.58■□□□□ 0.89
RAB40B-201ENST00000269347 TALDO1P37837 337 aa20.58■□□□□ 0.89
RAB40B-201ENST00000269347 EIF1P41567 113 aaKnown RBP20.58■□□□□ 0.89
RAB40B-201ENST00000269347 RIDAP52758 137 aaKnown RBP20.58■□□□□ 0.89
RAB40B-201ENST00000269347 RASGEF1BQ0VAM2 473 aa20.58■□□□□ 0.89
RAB40B-201ENST00000269347 SSPNQ14714 243 aa20.58■□□□□ 0.89
RAB40B-201ENST00000269347 LRFN4Q6PJG9 635 aa20.58■□□□□ 0.89
RAB40B-201ENST00000269347 CFAP77Q6ZQR2 320 aa20.58■□□□□ 0.89
RAB40B-201ENST00000269347 ESX1Q8N693 406 aa20.58■□□□□ 0.89
RAB40B-201ENST00000269347 ADPRHL1Q8NDY3 354 aa20.58■□□□□ 0.89
RAB40B-201ENST00000269347 NOXO1Q8NFA2 376 aa20.58■□□□□ 0.89
RAB40B-201ENST00000269347 RBMX2Q9Y388 322 aaKnown RBP20.58■□□□□ 0.89
RAB40B-201ENST00000269347 ZNF318Q5VUA4 2279 aa20.58■□□□□ 0.88
RAB40B-201ENST00000269347 CCR9P51686 369 aa20.58■□□□□ 0.88
RAB40B-201ENST00000269347 B3GALT5-AS1P59052 145 aa20.58■□□□□ 0.88
RAB40B-201ENST00000269347 MRPL28Q13084 256 aaKnown RBP20.58■□□□□ 0.88
RAB40B-201ENST00000269347 RFT1Q96AA3 541 aa20.58■□□□□ 0.88
RAB40B-201ENST00000269347 LIN37Q96GY3 246 aaPredicted RBP20.58■□□□□ 0.88
RAB40B-201ENST00000269347 ZNF486Q96H40 463 aaPredicted RBP20.58■□□□□ 0.88
RAB40B-201ENST00000269347 EDEM2Q9BV94 578 aa20.58■□□□□ 0.88
RAB40B-201ENST00000269347 DDA1Q9BW61 102 aa20.58■□□□□ 0.88
RAB40B-201ENST00000269347 RNF121Q9H920 327 aa20.58■□□□□ 0.88
RAB40B-201ENST00000269347 LHFPL6Q9Y693 200 aa20.58■□□□□ 0.88
RAB40B-201ENST00000269347 A0A0J9YW62 118 aa20.57■□□□□ 0.88
RAB40B-201ENST00000269347 A0A1W2PPL8 197 aa20.57■□□□□ 0.88
RAB40B-201ENST00000269347 TERTO14746 1132 aaKnown RBP20.57■□□□□ 0.88
RAB40B-201ENST00000269347 MT-CO3P00414 261 aa20.57■□□□□ 0.88
RAB40B-201ENST00000269347 DSCR4P56555 118 aaPredicted RBP20.57■□□□□ 0.88
RAB40B-201ENST00000269347 SPEM2Q0P670 501 aa20.57■□□□□ 0.88
RAB40B-201ENST00000269347 PYHIN1Q6K0P9 492 aa20.57■□□□□ 0.88
RAB40B-201ENST00000269347 H3F3CQ6NXT2 135 aa20.57■□□□□ 0.88
RAB40B-201ENST00000269347 MZT2BQ6NZ67 158 aa20.57■□□□□ 0.88
RAB40B-201ENST00000269347 KCTD18Q6PI47 426 aaPredicted RBP20.57■□□□□ 0.88
RAB40B-201ENST00000269347 YRDCQ86U90 279 aaKnown RBP20.57■□□□□ 0.88
RAB40B-201ENST00000269347 TMPRSS12Q86WS5 348 aa20.57■□□□□ 0.88
RAB40B-201ENST00000269347 BEST3Q8N1M1 668 aa20.57■□□□□ 0.88
RAB40B-201ENST00000269347 ASB5Q8WWX0 329 aa20.57■□□□□ 0.88
RAB40B-201ENST00000269347 SLC25A44Q96H78 314 aaPredicted RBP20.57■□□□□ 0.88
RAB40B-201ENST00000269347 OXGR1Q96P68 337 aa20.57■□□□□ 0.88
RAB40B-201ENST00000269347 ZNF385AQ96PM9 386 aaKnown RBP20.57■□□□□ 0.88
RAB40B-201ENST00000269347 SRXN1Q9BYN0 137 aa20.57■□□□□ 0.88
RAB40B-201ENST00000269347 CENPMQ9NSP4 180 aa20.57■□□□□ 0.88
RAB40B-201ENST00000269347 CYB5R1Q9UHQ9 305 aa20.57■□□□□ 0.88
RAB40B-201ENST00000269347 HDGFL3Q9Y3E1 203 aa20.57■□□□□ 0.88
RAB40B-201ENST00000269347 HMX3A6NHT5 357 aa20.56■□□□□ 0.88
RAB40B-201ENST00000269347 LRRC3CA6NJW4 275 aa20.56■□□□□ 0.88
RAB40B-201ENST00000269347 FAM47E-STBD1D6RA91 191 aa20.56■□□□□ 0.88
RAB40B-201ENST00000269347 PRKAR1AP10644 381 aa20.56■□□□□ 0.88
RAB40B-201ENST00000269347 INPP1P49441 399 aa20.56■□□□□ 0.88
RAB40B-201ENST00000269347 ZNF239Q16600 458 aaKnown RBP20.56■□□□□ 0.88
RAB40B-201ENST00000269347 UBE2NLQ5JXB2 153 aa20.56■□□□□ 0.88
RAB40B-201ENST00000269347 DND1Q8IYX4 353 aaKnown RBP20.56■□□□□ 0.88
RAB40B-201ENST00000269347 TSEN15Q8WW01 171 aaKnown RBP20.56■□□□□ 0.88
RAB40B-201ENST00000269347 ITGB1BP2Q9UKP3 347 aa20.56■□□□□ 0.88
RAB40B-201ENST00000269347 HPP00738 406 aa20.56■□□□□ 0.88
RAB40B-201ENST00000269347 RAB40ALP0C0E4 278 aa20.56■□□□□ 0.88
RAB40B-201ENST00000269347 ENPP1P22413 925 aa20.56■□□□□ 0.88
RAB40B-201ENST00000269347 CLDN20P56880 219 aa20.56■□□□□ 0.88
RAB40B-201ENST00000269347 CLRN1P58418 232 aa20.56■□□□□ 0.88
RAB40B-201ENST00000269347 ACER2Q5QJU3 275 aa20.56■□□□□ 0.88
RAB40B-201ENST00000269347 SLC25A47Q6Q0C1 308 aa20.56■□□□□ 0.88
RAB40B-201ENST00000269347 ZNF454Q8N9F8 522 aa20.56■□□□□ 0.88
RAB40B-201ENST00000269347 DUSP18Q8NEJ0 188 aa20.56■□□□□ 0.88
RAB40B-201ENST00000269347 SLC25A43Q8WUT9 341 aaPredicted RBP20.56■□□□□ 0.88
RAB40B-201ENST00000269347 RNF133Q8WVZ7 376 aa20.56■□□□□ 0.88
RAB40B-201ENST00000269347 ZC3HAV1LQ96H79 300 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms