RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Sirt5Q8K2C6 310 aa10.39□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Olfr394Q8VGR5 310 aa10.39□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Rpl22l1Q9D7S7 122 aaKnown RBP10.39□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Tmed7D3YZZ5 224 aa10.39□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Gm5519D3Z175 170 aa10.39□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Olfr173E9QAT7 321 aa10.39□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Gm21761J3QK00 171 aa10.39□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Pmm1O35621 262 aa10.39□□□□□ -0.75
Topbp1-201ENSMUST00000035164 EdaO54693 391 aa10.39□□□□□ -0.75
Topbp1-201ENSMUST00000035164 ArsgQ3TYD4 525 aa10.39□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Fbxo42Q6PDJ6 717 aa10.39□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Zfp790Q80ZX2 779 aa10.39□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Pced1bQ8BGX1 433 aaKnown RBP10.39□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Cnksr3Q8BMA3 555 aa10.39□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Vmn1r229Q8R2A9 306 aa10.39□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Cnih4Q9CX13 139 aa10.39□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Malrd1A2AJX4 2123 aa10.39□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Tmem229aB9EJI9 371 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Znf296E9Q6W4 445 aaKnown RBP10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Zfp955bL7N232 545 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 PipP02816 146 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Spi1P17433 272 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Rab11bP46638 218 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Il10raQ61727 575 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Cldn34b3Q80ZS5 209 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Oxa1lQ8BGA9 433 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Amdhd2Q8JZV7 409 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Babam2Q8K3W0 383 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Olfr868Q8VFI8 309 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Nrif2Q921B4 824 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 D10Wsu102eQ9CX66 185 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Ap1s2Q9DB50 160 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Psma1Q9R1P4 263 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Vmn2r58K7N6V2 862 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 DffbO54788 344 aaKnown RBP10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Smpd2O70572 419 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Polr1dP97304 133 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Mc2rQ64326 296 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Cggbp1Q8BHG9 167 aaKnown RBP10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Spryd4Q91WK1 207 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Dnttip1Q99LB0 328 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Sytl3Q99N48 607 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 OgfrQ99PG2 633 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Tex37Q9DAG4 180 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 BvesQ9ES83 358 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Zswim8Q3UHH1 1832 aaKnown RBP10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Calhm1D3Z291 348 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Tspan15F7BWT7 294 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Tmco2P0C1V4 183 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Fcer1aP20489 250 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Agbl5Q09M02 886 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Gpr39Q5U431 456 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Rsl1Q7M6Y1 485 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Mrps26Q80ZS3 200 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Klk14Q8CGR5 250 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 FgbQ8K0E8 481 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Olfr1143Q8VEU8 314 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Snx18Q91ZR2 614 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Mrpl43Q99N89 183 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Dph7Q9CYU6 477 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Olfr27Q9EQ90 311 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 StrcQ8VIM6 1809 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Gm4858A0A0A6YWS7 318 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 RnlsA7RDN6 342 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Gm20715E9Q3L7 95 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Vmn2r89O35199 507 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Hsd3b6O35469 373 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Agfg2Q80WC7 479 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 PisdQ8BSF4 406 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Acaa2Q8BWT1 397 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Olfr837Q8VFJ4 312 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Olfr1424Q8VFV1 313 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Mgat2Q921V5 442 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Tmem216Q9CQC4 141 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Elp4Q9ER73 422 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Dbf4Q9QZ41 663 aa10.38□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Jmjd1cQ69ZK6 2350 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Il17dA0A0B4J1G4 205 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Pom121l12A0A1B0GSJ4 278 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 SpaarA0A1B0GSZ0 75 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Mettl11bB2RXM4 283 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Srp54bE9PXC0 504 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Nr1h5E9Q5A6 505 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Ms4a7E9Q9V5 267 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 KitlgP20826 273 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 GrprP21729 384 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 EpxP49290 716 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Tra2bP62996 288 aaKnown RBP10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Epha4Q03137 986 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Lyg2Q3V1I0 213 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 SprnQ8BWU1 147 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Pot1Q91WC1 640 aaKnown RBP10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Bola1Q9D8S9 137 aaKnown RBP10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Slc46a3Q9DC26 460 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Mbd2Q9Z2E1 414 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Gm8797A0A0A6YW67 77 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Gm45716A0A1B0GRQ0 93 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Olfr1314A2AVL6 312 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Scgb1b30A2BH64 92 aa10.37□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Btbd2E9PUS2 523 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms