RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 MYBPHQ13203 477 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 KCTD18Q6PI47 426 aaPredicted RBP15.18■□□□□ 0.02
PHGDH-229ENST00000641891 CORO6Q6QEF8 472 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 DCXRQ7Z4W1 244 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 ZNF227Q86WZ6 799 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 CATSPERDQ86XM0 798 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 PLEKHA1Q9HB21 404 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 BEX1Q9HBH7 125 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 STEAP1Q9UHE8 339 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 C7orf66A4D0T2 115 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 D6RAR5 112 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 GABARAPH6UMI1 98 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 KRT33AO76009 404 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 DKK1O94907 266 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 RAB40ALP0C0E4 278 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 EFNB2P52799 333 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 BIDP55957 195 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 TAS2R20P59543 309 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 DYRK1AQ13627 763 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 MFSD13AQ14CX5 517 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 PCOLCEQ15113 449 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 PRAMEF20Q5VT98 475 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 FAM205BPQ63HN1 556 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 SFRP4Q6FHJ7 346 aaPredicted RBP15.18■□□□□ 0.02
PHGDH-229ENST00000641891 SLC22A8Q8TCC7 542 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 RAB40AQ8WXH6 277 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 MS4A3Q96HJ5 214 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 HRASLSQ9HDD0 168 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 SERINC1Q9NRX5 453 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 ALKBH4Q9NXW9 302 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 KLHL9Q9P2J3 617 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 B3GAT1Q9P2W7 334 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 EMC9Q9Y3B6 208 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 ETV7Q9Y603 341 aa15.18■□□□□ 0.02
PHGDH-229ENST00000641891 LOC101059948A0A1B0GTJ6 334 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 A0A1W2PNR3 127 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 ETV2O00321 342 aaPredicted RBP15.17■□□□□ 0.02
PHGDH-229ENST00000641891 SRSF10O75494 262 aaKnown RBP15.17■□□□□ 0.02
PHGDH-229ENST00000641891 ITGA5P08648 1049 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 ZNF823P16415 610 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 FAPQ12884 760 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 ASCC1Q8N9N2 400 aaKnown RBP15.17■□□□□ 0.02
PHGDH-229ENST00000641891 BEST4Q8NFU0 473 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 OR2M3Q8NG83 312 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 OR11H7Q8NGC8 314 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 OR51D1Q8NGF3 324 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 SPACA9Q96E40 222 aaPredicted RBP15.17■□□□□ 0.02
PHGDH-229ENST00000641891 MRGPRX4Q96LA9 322 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 MED28Q9H204 178 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 EIF1AYO14602 144 aaKnown RBP15.17■□□□□ 0.02
PHGDH-229ENST00000641891 LAMTOR5O43504 91 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 KHDRBS3O75525 346 aaKnown RBP15.17■□□□□ 0.02
PHGDH-229ENST00000641891 C1QBP02746 253 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 GZMKP49863 264 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 MAB21L1Q13394 359 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 SLC22A10Q63ZE4 541 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 FAAP20Q6NZ36 180 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 BIVMQ86UB2 503 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 ZNF454Q8N9F8 522 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 PLPP7Q8NBV4 271 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 ST7LQ8TDW4 575 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 FCAMRQ8WWV6 532 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 ASB5Q8WWX0 329 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 C7orf50Q9BRJ6 194 aaKnown RBP15.17■□□□□ 0.02
PHGDH-229ENST00000641891 MRI1Q9BV20 369 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 POTEKPQ9BYX7 375 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 NKIRAS2Q9NYR9 191 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 FLVCR2Q9UPI3 526 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 DHDHQ9UQ10 334 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 B3GALT1Q9Y5Z6 326 aa15.17■□□□□ 0.02
PHGDH-229ENST00000641891 IGLV3-32A0A0A0MS00 114 aa15.16■□□□□ 0.02
PHGDH-229ENST00000641891 TMEM127O75204 238 aa15.16■□□□□ 0.02
PHGDH-229ENST00000641891 UMODP07911 640 aa15.16■□□□□ 0.02
PHGDH-229ENST00000641891 H2AFB2P0C5Z0 115 aa15.16■□□□□ 0.02
PHGDH-229ENST00000641891 MSX1P28360 303 aa15.16■□□□□ 0.02
PHGDH-229ENST00000641891 GSG1Q2KHT4 349 aa15.16■□□□□ 0.02
PHGDH-229ENST00000641891 SLC25A53Q5H9E4 307 aa15.16■□□□□ 0.02
PHGDH-229ENST00000641891 BTN2A1Q7KYR7 527 aa15.16■□□□□ 0.02
PHGDH-229ENST00000641891 ELP5Q8TE02 316 aa15.16■□□□□ 0.02
PHGDH-229ENST00000641891 GIMAP1Q8WWP7 306 aa15.16■□□□□ 0.02
PHGDH-229ENST00000641891 GTPBP2Q9BX10 602 aaKnown RBP15.16■□□□□ 0.02
PHGDH-229ENST00000641891 OR51J1Q9H342 316 aa15.16■□□□□ 0.02
PHGDH-229ENST00000641891 SMOC1Q9H4F8 434 aa15.16■□□□□ 0.02
PHGDH-229ENST00000641891 TAS2R4Q9NYW5 299 aa15.16■□□□□ 0.02
PHGDH-229ENST00000641891 RALGAPA1Q6GYQ0 2036 aa15.16■□□□□ 0.02
PHGDH-229ENST00000641891 CENPBD1B2RD01 187 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 ZNF814B7Z6K7 855 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 LMX1BO60663 402 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 KLK2P20151 261 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 EIF1AXP47813 144 aaKnown RBP15.15■□□□□ 0.02
PHGDH-229ENST00000641891 IL11RAQ14626 422 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 DNM1P34Q6PK57 102 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 FAM198BQ6UWH4 519 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 WDSUB1Q8N9V3 476 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 MR1Q95460 341 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 PHF21AQ96BD5 680 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 CMKLR1Q99788 373 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 C20orf85Q9H1P6 137 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 SDHAF3Q9NRP4 125 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 COPZ2Q9P299 210 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms