RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 FABP6P51161 128 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 NKX6-1P78426 367 aaPredicted RBP23.09■■□□□ 1.29
VEGFA-231ENST00000640499 SLC36A2Q495M3 483 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 DPPA2Q7Z7J5 298 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 LURAP1LQ8IV03 231 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 OR6V1Q8N148 313 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 PAQR4Q8N4S7 273 aaPredicted RBP23.09■■□□□ 1.29
VEGFA-231ENST00000640499 NPEPL1Q8NDH3 523 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 IL17RDQ8NFM7 739 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 ZNF416Q9BWM5 594 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 GSX2Q9BZM3 304 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 GRIP2Q9C0E4 1043 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 YY1AP1Q9H869 796 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 EMC7Q9NPA0 242 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 ARMC1Q9NVT9 282 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 COA3Q9Y2R0 106 aaPredicted RBP23.09■■□□□ 1.29
VEGFA-231ENST00000640499 ZNF469Q96JG9 3925 aaPredicted RBP23.09■■□□□ 1.29
VEGFA-231ENST00000640499 IGLV1-36A0A0B4J1U3 117 aa23.08■■□□□ 1.29
VEGFA-231ENST00000640499 GSTM3P21266 225 aa23.08■■□□□ 1.29
VEGFA-231ENST00000640499 PTH2RP49190 550 aa23.08■■□□□ 1.29
VEGFA-231ENST00000640499 PSG4Q00888 419 aa23.08■■□□□ 1.29
VEGFA-231ENST00000640499 MSMPQ1L6U9 139 aa23.08■■□□□ 1.29
VEGFA-231ENST00000640499 RPL13AP3Q6NVV1 102 aa23.08■■□□□ 1.29
VEGFA-231ENST00000640499 ZNF544Q6NX49 715 aa23.08■■□□□ 1.29
VEGFA-231ENST00000640499 LEG1Q6P5S2 330 aa23.08■■□□□ 1.29
VEGFA-231ENST00000640499 LRRC75A-AS1Q8N1F1 130 aa23.08■■□□□ 1.29
VEGFA-231ENST00000640499 NUP37Q8NFH4 326 aa23.08■■□□□ 1.29
VEGFA-231ENST00000640499 OR52E2Q8NGJ4 325 aa23.08■■□□□ 1.29
VEGFA-231ENST00000640499 SNX18Q96RF0 628 aa23.08■■□□□ 1.29
VEGFA-231ENST00000640499 TSSK6Q9BXA6 273 aa23.08■■□□□ 1.29
VEGFA-231ENST00000640499 RNF121Q9H920 327 aa23.08■■□□□ 1.29
VEGFA-231ENST00000640499 CA10Q9NS85 328 aa23.08■■□□□ 1.29
VEGFA-231ENST00000640499 B9D1Q9UPM9 204 aa23.08■■□□□ 1.29
VEGFA-231ENST00000640499 KHDRBS3O75525 346 aaKnown RBP23.07■■□□□ 1.28
VEGFA-231ENST00000640499 GPANK1O95872 356 aa23.07■■□□□ 1.28
VEGFA-231ENST00000640499 CST2P09228 141 aa23.07■■□□□ 1.28
VEGFA-231ENST00000640499 CCL2P13500 99 aa23.07■■□□□ 1.28
VEGFA-231ENST00000640499 MSR1P21757 451 aa23.07■■□□□ 1.28
VEGFA-231ENST00000640499 APOBEC3AP31941 199 aaPredicted RBP23.07■■□□□ 1.28
VEGFA-231ENST00000640499 THBS4P35443 961 aa23.07■■□□□ 1.28
VEGFA-231ENST00000640499 CDKN1AP38936 164 aa23.07■■□□□ 1.28
VEGFA-231ENST00000640499 ADAM8P78325 824 aa23.07■■□□□ 1.28
VEGFA-231ENST00000640499 PABPC1L2AQ5JQF8 200 aa23.07■■□□□ 1.28
VEGFA-231ENST00000640499 TMEM53Q6P2H8 277 aa23.07■■□□□ 1.28
VEGFA-231ENST00000640499 MUC15Q8N387 334 aa23.07■■□□□ 1.28
VEGFA-231ENST00000640499 LNX2Q8N448 690 aa23.07■■□□□ 1.28
VEGFA-231ENST00000640499 SDR9C7Q8NEX9 313 aa23.07■■□□□ 1.28
VEGFA-231ENST00000640499 OR4F15Q8NGB8 312 aa23.07■■□□□ 1.28
VEGFA-231ENST00000640499 PERPQ96FX8 193 aa23.07■■□□□ 1.28
VEGFA-231ENST00000640499 KCNS3Q9BQ31 491 aa23.07■■□□□ 1.28
VEGFA-231ENST00000640499 FN3KQ9H479 309 aa23.07■■□□□ 1.28
VEGFA-231ENST00000640499 TMCC2O75069 709 aa23.06■■□□□ 1.28
VEGFA-231ENST00000640499 E2F6O75461 281 aa23.06■■□□□ 1.28
VEGFA-231ENST00000640499 NR4A1P22736 598 aa23.06■■□□□ 1.28
VEGFA-231ENST00000640499 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.06■■□□□ 1.28
VEGFA-231ENST00000640499 COX10Q12887 443 aa23.06■■□□□ 1.28
VEGFA-231ENST00000640499 ADIPOQQ15848 244 aa23.06■■□□□ 1.28
VEGFA-231ENST00000640499 ATP6AP1Q15904 470 aa23.06■■□□□ 1.28
VEGFA-231ENST00000640499 SWI5Q1ZZU3 235 aa23.06■■□□□ 1.28
VEGFA-231ENST00000640499 SHQ1Q6PI26 577 aaKnown RBP23.06■■□□□ 1.28
VEGFA-231ENST00000640499 WFDC11Q8NEX6 87 aa23.06■■□□□ 1.28
VEGFA-231ENST00000640499 WNT5BQ9H1J7 359 aa23.06■■□□□ 1.28
VEGFA-231ENST00000640499 RERGLQ9H628 205 aa23.06■■□□□ 1.28
VEGFA-231ENST00000640499 SRA1Q9HD15 236 aaKnown RBP23.06■■□□□ 1.28
VEGFA-231ENST00000640499 CBLN4Q9NTU7 201 aa23.06■■□□□ 1.28
VEGFA-231ENST00000640499 TBC1D23Q9NUY8 699 aa23.06■■□□□ 1.28
VEGFA-231ENST00000640499 FBXL3Q9UKT7 428 aa23.06■■□□□ 1.28
VEGFA-231ENST00000640499 AP4S1Q9Y587 144 aa23.06■■□□□ 1.28
VEGFA-231ENST00000640499 GAAP10253 952 aa23.05■■□□□ 1.28
VEGFA-231ENST00000640499 AGAP6Q5VW22 663 aa23.05■■□□□ 1.28
VEGFA-231ENST00000640499 KRT80Q6KB66 452 aa23.05■■□□□ 1.28
VEGFA-231ENST00000640499 VHLLQ6RSH7 139 aa23.05■■□□□ 1.28
VEGFA-231ENST00000640499 ZBTB46Q86UZ6 589 aa23.05■■□□□ 1.28
VEGFA-231ENST00000640499 JAZF1Q86VZ6 243 aa23.05■■□□□ 1.28
VEGFA-231ENST00000640499 GLB1L2Q8IW92 636 aa23.05■■□□□ 1.28
VEGFA-231ENST00000640499 FBXL14Q8N1E6 418 aa23.05■■□□□ 1.28
VEGFA-231ENST00000640499 SLC30A7Q8NEW0 376 aa23.05■■□□□ 1.28
VEGFA-231ENST00000640499 OR52L1Q8NGH7 329 aa23.05■■□□□ 1.28
VEGFA-231ENST00000640499 AKR7LQ8NHP1 331 aa23.05■■□□□ 1.28
VEGFA-231ENST00000640499 ZNRF4Q8WWF5 429 aa23.05■■□□□ 1.28
VEGFA-231ENST00000640499 C11orf40Q8WZ69 217 aa23.05■■□□□ 1.28
VEGFA-231ENST00000640499 OR2H1Q9GZK4 316 aa23.05■■□□□ 1.28
VEGFA-231ENST00000640499 CXorf56Q9H5V9 222 aa23.05■■□□□ 1.28
VEGFA-231ENST00000640499 FAIMQ9NVQ4 179 aa23.05■■□□□ 1.28
VEGFA-231ENST00000640499 ARFGEF3Q5TH69 2177 aa23.04■■□□□ 1.28
VEGFA-231ENST00000640499 LOC100509620A0A075B734 347 aa23.04■■□□□ 1.28
VEGFA-231ENST00000640499 NDUFS7O75251 213 aa23.04■■□□□ 1.28
VEGFA-231ENST00000640499 DEAF1O75398 565 aaPredicted RBP23.04■■□□□ 1.28
VEGFA-231ENST00000640499 CIB2O75838 187 aa23.04■■□□□ 1.28
VEGFA-231ENST00000640499 APEX1P27695 318 aaKnown RBP23.04■■□□□ 1.28
VEGFA-231ENST00000640499 NOS3P29474 1203 aa23.04■■□□□ 1.28
VEGFA-231ENST00000640499 KCNMB1Q16558 191 aa23.04■■□□□ 1.28
VEGFA-231ENST00000640499 SLC36A3Q495N2 470 aa23.04■■□□□ 1.28
VEGFA-231ENST00000640499 CYB561A3Q8NBI2 242 aa23.04■■□□□ 1.28
VEGFA-231ENST00000640499 NRBF2Q96F24 287 aa23.04■■□□□ 1.28
VEGFA-231ENST00000640499 CCNB1IP1Q9NPC3 277 aa23.04■■□□□ 1.28
VEGFA-231ENST00000640499 RPRD1BQ9NQG5 326 aaKnown RBP23.04■■□□□ 1.28
VEGFA-231ENST00000640499 TMEM129A0AVI4 362 aa23.03■■□□□ 1.28
VEGFA-231ENST00000640499 FAM171A2A8MVW0 826 aa23.03■■□□□ 1.28
VEGFA-231ENST00000640499 ACTR3P61158 418 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms