RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 LALBAP00709 142 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 CELP19835 753 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 NR4A1P22736 598 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 NTF4P34130 210 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 EIF2B1Q14232 305 aaKnown RBP15.92■□□□□ 0.14
VRK3-225ENST00000601912 CTF1Q16619 201 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 PCK2Q16822 640 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 PHYHD1Q5SRE7 291 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 OTPQ5XKR4 325 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 KCTD18Q6PI47 426 aaPredicted RBP15.92■□□□□ 0.14
VRK3-225ENST00000601912 PLXDC2Q6UX71 529 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 ATCAYQ86WG3 371 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 GPR137Q96N19 417 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 RBM24Q9BX46 236 aaKnown RBP15.92■□□□□ 0.14
VRK3-225ENST00000601912 IKZF2Q9UKS7 526 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 TMEM8BA6NDV4 472 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 METTL15A6NJ78 407 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 AHRRA9YTQ3 701 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 MAGEB4O15481 346 aaPredicted RBP15.92■□□□□ 0.14
VRK3-225ENST00000601912 KRT33AO76009 404 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 CDAP32320 146 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 MRPL28Q13084 256 aaKnown RBP15.92■□□□□ 0.14
VRK3-225ENST00000601912 SF3B4Q15427 424 aaKnown RBP eCLIP15.92■□□□□ 0.14
VRK3-225ENST00000601912 KCNMB1Q16558 191 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 LINC00303Q3SY05 128 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 ZNF684Q5T5D7 378 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 RIPPLY2Q5TAB7 128 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 ZFP41Q8N8Y5 198 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 PELI1Q96FA3 418 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 GLRX2Q9NS18 164 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 POLR1DQ9Y2S0 133 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 CACNA1AO00555 2505 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 PSMD9O00233 223 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 SLC22A1O15245 554 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 UPK3AO75631 287 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 TGM6O95932 706 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 SIRPAP78324 504 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 CCDC58Q4VC31 144 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 ADGRE4PQ86SQ3 457 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 YIPF7Q8N8F6 280 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 OR5M9Q8NGP3 310 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 OR2AJ1Q8NGZ0 328 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 TRIB1Q96RU8 372 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 MROQ9BYG7 248 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 OR51E2Q9H255 320 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 SLCO5A1Q9H2Y9 848 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 NELFAQ9H3P2 528 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 POLE4Q9NR33 117 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 ACOXLQ9NUZ1 547 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 CLEC4AQ9UMR7 237 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 STUB1Q9UNE7 303 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 UGT2A1Q9Y4X1 527 aa15.91■□□□□ 0.14
VRK3-225ENST00000601912 LAMA5O15230 3695 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 LOC100506127A0A0U1RQW1 187 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 MED19A0JLT2 244 aaPredicted RBP15.9■□□□□ 0.14
VRK3-225ENST00000601912 HSPB2A8KAH6 182 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 OR8G3PP0DMU2 310 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 PSKH1P11801 424 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 MSR1P21757 451 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 GABRA5P31644 462 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 LSM3P62310 102 aaKnown RBP15.9■□□□□ 0.14
VRK3-225ENST00000601912 HSPB2Q16082 182 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 SGCAQ16586 387 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 GDPGP1Q6ZNW5 385 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 DCXRQ7Z4W1 244 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 KRT77Q7Z794 578 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 ALDH16A1Q8IZ83 802 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 OR52N5Q8NH56 324 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 CPT1CQ8TCG5 803 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 RPL3LQ92901 407 aaKnown RBP15.9■□□□□ 0.14
VRK3-225ENST00000601912 APH1AQ96BI3 265 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 OR8B4Q96RC9 309 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 CHCHD6Q9BRQ6 235 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 ABHD6Q9BV23 337 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 LINC00470Q9BZP3 86 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 CRLF2Q9HC73 371 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 CLCF1Q9UBD9 225 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 CYB5R1Q9UHQ9 305 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 MRM2Q9UI43 246 aaKnown RBP15.9■□□□□ 0.14
VRK3-225ENST00000601912 SSR3Q9UNL2 185 aa15.9■□□□□ 0.14
VRK3-225ENST00000601912 E9PI62 339 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 PLPP2O43688 288 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 ATE1O95260 518 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 CD53P19397 219 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 NPR2P20594 1047 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 LSM6P62312 80 aaKnown RBP15.89■□□□□ 0.13
VRK3-225ENST00000601912 ROM1Q03395 351 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 RPL22L1Q6P5R6 122 aaKnown RBP15.89■□□□□ 0.13
VRK3-225ENST00000601912 FOXL2NBQ6ZUU3 175 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 LINC00346Q8IVM7 164 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 ZNF679Q8IYX0 411 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 TMEM203Q969S6 136 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 GMPPAQ96IJ6 420 aaPredicted RBP15.89■□□□□ 0.13
VRK3-225ENST00000601912 ALKBH3Q96Q83 286 aaPredicted RBP15.89■□□□□ 0.13
VRK3-225ENST00000601912 C1orf198Q9H425 327 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 EMC7Q9NPA0 242 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 EXOSC4Q9NPD3 245 aaKnown RBP15.89■□□□□ 0.13
VRK3-225ENST00000601912 PRR32B1ATL7 298 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 TGM4P49221 684 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 VBP1P61758 197 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms