RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 CHD3Q12873 2000 aaKnown RBP10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 DNAJC13O75165 2243 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 A0A1W2PPL8 197 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 ZNF587BE7ETH6 402 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 WBP4O75554 376 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 ATE1O95260 518 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 HLA-DQA2P01906 255 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 QDPRP09417 244 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 CTSSP25774 331 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 HTR1FP30939 366 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 PYCR1P32322 319 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 GUCA1AP43080 201 aaPredicted RBP10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 OR3A2P47893 321 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 BLVRAP53004 296 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 NUDT6P53370 316 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 CSNK2BP67870 215 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 GLO1Q04760 184 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 ZNF91Q05481 1191 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 FMODQ06828 376 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 PMPCAQ10713 525 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 GUSBP1Q15486 140 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 C6orf141Q5SZD1 244 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 AADACL4Q5VUY2 407 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 SEM1Q6ZVN7 128 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 MEPCEQ7L2J0 689 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 NUFIP2Q7Z417 695 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 BCDIN3DQ7Z5W3 292 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 WDFY1Q8IWB7 410 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 BPIFB6Q8NFQ5 453 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 NSMAFQ92636 917 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 MCHR2Q969V1 340 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 TSSK2Q96PF2 358 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 HCAR1Q9BXC0 346 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 NUAK2Q9H093 628 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 SRA1Q9HD15 236 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 UBAP1Q9NZ09 502 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 WARS2Q9UGM6 360 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 FOXD3Q9UJU5 478 aaPredicted RBP10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 PROCRQ9UNN8 238 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 MOKQ9UQ07 419 aa10.61□□□□□ -0.71
SHKBP1-213ENST00000597325 IRGMA1A4Y4 181 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 SLC1A7O00341 560 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 UPK3AO75631 287 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 SMNDC1O75940 238 aaKnown RBP eCLIP10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 GLCEO94923 617 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 IGHV3-9P01782 118 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 CLUP10909 449 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 CTLA4P16410 223 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 SLC2A5P22732 501 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 CEACAM8P31997 349 aaPredicted RBP10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 OPRM1P35372 400 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 ATP6V1E1P36543 226 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 KIR2DL2P43627 348 aaPredicted RBP10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 MTNR1AP48039 350 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 CHN2P52757 468 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 CXCR4P61073 352 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 ROR2Q01974 943 aaKnown RBP10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 POU4F2Q12837 409 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 TMED1Q13445 227 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 SMN1Q16637 294 aaKnown RBP10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 HIST3H3Q16695 136 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 RBM48Q5RL73 367 aaKnown RBP10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 TSPO2Q5TGU0 170 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 ZBTB46Q86UZ6 589 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 CDC20BQ86Y33 519 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 GLB1L2Q8IW92 636 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 OR6V1Q8N148 313 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 OR51L1Q8NGJ5 315 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 ASB5Q8WWX0 329 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 RND1Q92730 232 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 PTP4A1Q93096 173 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 DDOQ99489 341 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 RBM24Q9BX46 236 aaKnown RBP10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 B9D1Q9UPM9 204 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 TPRKBQ9Y3C4 175 aa10.6□□□□□ -0.71
SHKBP1-213ENST00000597325 IGLV1-36A0A0B4J1U3 117 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 CCDC182A6NF36 153 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 EFCAB10A6NFE3 127 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 FAM90A27PA6NNH2 459 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 DVL2O14641 736 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 DHHO43323 396 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 CRLF1O75462 422 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 TNFAIP8O95379 198 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 RAF1P04049 648 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 CCDC159P0C7I6 412 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 DBTP11182 482 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 GSTT1P30711 240 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 CHRNB4P30926 498 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 NTF4P34130 210 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 FOXF2Q12947 444 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 KLHL22Q53GT1 634 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 PHYHD1Q5SRE7 291 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 C10orf128Q5T292 105 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 FBXW9Q5XUX1 488 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 VWA1Q6PCB0 445 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 SLC25A47Q6Q0C1 308 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 TFAP2EQ6VUC0 442 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 NAXEQ8NCW5 288 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 ZNF540Q8NDQ6 660 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms