RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 FOXN4Q96NZ1 517 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 MNTQ99583 582 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 MND1Q9BWT6 205 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 CDADC1Q9BWV3 514 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 RBM24Q9BX46 236 aaKnown RBP11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 JAM3Q9BX67 310 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 ULBP2Q9BZM5 246 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 YIPF3Q9GZM5 350 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 SEC61A2Q9H9S3 476 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 ASF1BQ9NVP2 202 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 CLCF1Q9UBD9 225 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 CLEC2DQ9UHP7 191 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 ABCA2Q9BZC7 2435 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 IGKV1D-43A0A0B4J1Z2 117 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 CD8B2A6NJW9 211 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 FIGNL2A6NMB9 653 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 PRRG2O14669 202 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 TMCC2O75069 709 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 UPK3AO75631 287 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 MPZL1O95297 269 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 GPANK1O95872 356 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 IGHA1P01876 353 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 ADRA2AP08913 450 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 NTF4P34130 210 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 ALDH3B2P48448 385 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 TDGF1P3P51864 188 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 HCCSP53701 268 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 RBPJQ06330 500 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 MED22Q15528 200 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 TBCEQ15813 527 aaPredicted RBP11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 ACSF3Q4G176 576 aaPredicted RBP11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 C1orf185Q5T7R7 199 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 NSUN5P2Q63ZY6 315 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 OR2A2Q6IF42 318 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 LYPD4Q6UWN0 246 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 RPTNQ6XPR3 784 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 TMPRSS11AQ6ZMR5 421 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 GPR141Q7Z602 305 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 TIGD4Q8IY51 512 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 OR6N2Q8NGY6 317 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 PRR7Q8TB68 274 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 SMAP2Q8WU79 429 aaPredicted RBP11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 APH1AQ96BI3 265 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 GMPPAQ96IJ6 420 aaPredicted RBP11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 TM9SF2Q99805 663 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 LINC00470Q9BZP3 86 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 WDR76Q9H967 626 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 MARCH7Q9H992 704 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 ERVK13-1Q9NX77 482 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 TAS2R16Q9NYV7 291 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 UPB1Q9UBR1 384 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 TMEM14AQ9Y6G1 99 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 MED13LQ71F56 2210 aa11.54□□□□□ -0.56
SHKBP1-209ENST00000595803 NAV3Q8IVL0 2385 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 A0A1W2PQL4 384 aaPredicted RBP11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 PHYHO14832 338 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 INMTO95050 263 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 PTHP01270 115 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 TFP02787 698 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 LCKP06239 509 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 SPARCP09486 303 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 PSMB9P28065 219 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 ENTPD1P49961 510 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 ZNF133P52736 654 aaPredicted RBP11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 ADAM8P78325 824 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 ZNF85Q03923 595 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 GALEQ14376 348 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 SGCAQ16586 387 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 C10orf128Q5T292 105 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 UBE2UQ5VVX9 321 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 XAF1Q6GPH4 301 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 ZNF367Q7RTV3 350 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 NUFIP2Q7Z417 695 aaKnown RBP11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 CD163Q86VB7 1156 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 THEM6Q8WUY1 208 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 C11orf40Q8WZ69 217 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 SLX1AQ9BQ83 275 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 ALG8Q9BVK2 526 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 SLCO5A1Q9H2Y9 848 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 MRPL22Q9NWU5 206 aaKnown RBP11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 LAMP5Q9UJQ1 280 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 FOXD3Q9UJU5 478 aaPredicted RBP11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 CAB39Q9Y376 341 aaPredicted RBP11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 EMC9Q9Y3B6 208 aa11.53□□□□□ -0.56
SHKBP1-209ENST00000595803 TMEM129A0AVI4 362 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 SS18L1O75177 396 aaPredicted RBP11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 HRGP04196 525 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 LIMS3P0CW19 117 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 LIMS4P0CW20 117 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 HSMCR30P0CW71 290 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 EDN3P14138 238 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 AGTR1P30556 359 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 CDAP32320 146 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 PER3P56645 1201 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 SPHARQ15513 63 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 PRR30Q53SZ7 412 aaPredicted RBP11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 RIPPLY2Q5TAB7 128 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 TSPO2Q5TGU0 170 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 OR2G6Q5TZ20 316 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms