RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.55□□□□□ -1.36
VMP1-213ENST00000591877 TMEM181Q9P2C4 612 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 P2RX2Q9UBL9 471 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 TRAPPC4Q9Y296 219 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 SPIN1Q9Y657 262 aaPredicted RBP6.55□□□□□ -1.36
VMP1-213ENST00000591877 CR1P17927 2039 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 OR5H1A6NKK0 313 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 SHISA9B4DS77 424 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 PDLIM1O00151 329 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 CLOCKO15516 846 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 ANP32DO95626 131 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 LY6G6DO95868 133 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 SOD3P08294 240 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 FKBP2P26885 142 aaKnown RBP6.54□□□□□ -1.36
VMP1-213ENST00000591877 P2RY4P51582 365 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 CRISP3P54108 245 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 LTBQ06643 244 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 BNIP2Q12982 314 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 SLC17A1Q14916 467 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 PPA1Q15181 289 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 RGNQ15493 299 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 GABRA6Q16445 453 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 PGGHGQ32M88 737 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 KRTAP21-3Q3LHN1 58 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 PAGE3Q5JUK9 113 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 C6orf10Q5SRN2 563 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 LRIF1Q5T3J3 769 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 COMTD1Q86VU5 262 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 PEX5LQ8IYB4 626 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 ZNF100Q8IYN0 542 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 TMEM99Q8N816 258 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 ZIC4Q8N9L1 334 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 KBTBD8Q8NFY9 601 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 OR52E4Q8NGH9 312 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 PIGXQ8TBF5 258 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 MAL2Q969L2 176 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 DDIT4LQ96D03 193 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 ITCHQ96J02 903 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 WDFY2Q96P53 400 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 TOR3AQ9H497 397 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 CXorf56Q9H5V9 222 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 ESRP2Q9H6T0 727 aaKnown RBP6.54□□□□□ -1.36
VMP1-213ENST00000591877 RMND5AQ9H871 391 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 TCF7L2Q9NQB0 619 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 INTS9Q9NV88 658 aaKnown RBP6.54□□□□□ -1.36
VMP1-213ENST00000591877 EMC3Q9P0I2 261 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 LAMP3Q9UQV4 416 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 ZNF443Q9Y2A4 671 aaPredicted RBP6.54□□□□□ -1.36
VMP1-213ENST00000591877 NOSIPQ9Y314 301 aaKnown RBP6.54□□□□□ -1.36
VMP1-213ENST00000591877 RNF115Q9Y4L5 304 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 FLVCR1Q9Y5Y0 555 aa6.54□□□□□ -1.36
VMP1-213ENST00000591877 CSPG4Q6UVK1 2322 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 A0A096LPI6 279 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 TRBV5-3A0A0A0MS03 114 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 A0A0G2JPF8 293 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 A0A1W2PR80 420 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 HNRNPCL2B2RXH8 293 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 HNRNPCL3B7ZW38 293 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 UBE2CO00762 179 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 GPR171O14626 319 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 NPIPB7O75200 414 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 MRPL33O75394 65 aaKnown RBP6.53□□□□□ -1.36
VMP1-213ENST00000591877 RAD51DO75771 328 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 AKR7A3O95154 331 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 TGDSO95455 350 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 CD8AP01732 235 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 TFP02787 698 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 HNRNPCL4P0DMR1 293 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 GABRB1P18505 474 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 GGT1P19440 569 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 SLC35A1P78382 337 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 HOXC5Q00444 222 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 SPOCK1Q08629 439 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 CEACAM7Q14002 265 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 GNA13Q14344 377 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 STK11Q15831 433 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 ZNF672Q499Z4 452 aaPredicted RBP6.53□□□□□ -1.36
VMP1-213ENST00000591877 LIN52Q52LA3 116 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 TIMM23BQ5SRD1 257 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 TSPO2Q5TGU0 170 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 GKAP1Q5VSY0 366 aaPredicted RBP6.53□□□□□ -1.36
VMP1-213ENST00000591877 PAQR6Q6TCH4 344 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 GLDNQ6ZMI3 551 aaPredicted RBP6.53□□□□□ -1.36
VMP1-213ENST00000591877 SERPINA11Q86U17 422 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 IGFN1Q86VF2 1251 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 ZNF440Q8IYI8 595 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 CADM2Q8N3J6 435 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 TMEM217Q8N7C4 229 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 APH1AQ96BI3 265 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 ZHX1-C8orf76Q96EF9 292 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 MUS81Q96NY9 551 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 ZNF385AQ96PM9 386 aaKnown RBP6.53□□□□□ -1.36
VMP1-213ENST00000591877 CCDC28BQ9BUN5 200 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 IKZF5Q9H5V7 419 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 BCL2L10Q9HD36 194 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 A4GALTQ9NPC4 353 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 SLC7A10Q9NS82 523 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 CALML5Q9NZT1 146 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 CCDC167Q9P0B6 97 aa6.53□□□□□ -1.36
VMP1-213ENST00000591877 VAPAQ9P0L0 249 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms