RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 WBP4O75554 376 aaKnown RBP13.3□□□□□ -0.28
ATG4D-211ENST00000589753 TFP02787 698 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 HRGP04196 525 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 SCG5P05408 212 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 RNF224P0DH78 156 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 ZNF823P16415 610 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 HOXC12P31275 282 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 CCKARP32238 428 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 CDK5R2Q13319 367 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 TMED1Q13445 227 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 MEP1BQ16820 701 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 HIKESHIQ53FT3 197 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 FAM27BQ5VT28 67 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 LYPD4Q6UWN0 246 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 B3GLCTQ6Y288 498 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.3□□□□□ -0.28
ATG4D-211ENST00000589753 SKA3Q8IX90 412 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 LRRC18Q8N456 261 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 ZNF511Q8NB15 262 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 OR10H5Q8NGA6 315 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 FBLIM1Q8WUP2 373 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 S100PBPQ96BU1 408 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 SH3GL3Q99963 347 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 USB1Q9BQ65 265 aaKnown RBP13.3□□□□□ -0.28
ATG4D-211ENST00000589753 ACTR6Q9GZN1 396 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 OR10A4Q9H209 315 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 EMC7Q9NPA0 242 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 MRPL22Q9NWU5 206 aaKnown RBP13.3□□□□□ -0.28
ATG4D-211ENST00000589753 WARS2Q9UGM6 360 aaKnown RBP13.3□□□□□ -0.28
ATG4D-211ENST00000589753 HIVEP3Q5T1R4 2406 aa13.3□□□□□ -0.28
ATG4D-211ENST00000589753 SH3D21A4FU49 640 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 CLEC18AA5D8T8 446 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 OR5H1A6NKK0 313 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 CST2P09228 141 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 HOXB1P14653 301 aaPredicted RBP13.29□□□□□ -0.28
ATG4D-211ENST00000589753 CAPZA2P47755 286 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 UBE2NP61088 152 aaKnown RBP13.29□□□□□ -0.28
ATG4D-211ENST00000589753 LSM6P62312 80 aaKnown RBP13.29□□□□□ -0.28
ATG4D-211ENST00000589753 ADAM8P78325 824 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 SMN1Q16637 294 aaKnown RBP13.29□□□□□ -0.28
ATG4D-211ENST00000589753 OTPQ5XKR4 325 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 KRT80Q6KB66 452 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 UGT2A3Q6UWM9 527 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 CLEC18BQ6UXF7 455 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 SLC16A14Q7RTX9 510 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 CCDC36Q8IYA8 594 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 CLEC18CQ8NCF0 446 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 NANOS1Q8WY41 292 aaKnown RBP13.29□□□□□ -0.28
ATG4D-211ENST00000589753 INTS14Q96SY0 518 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 ZNF416Q9BWM5 594 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 KCNN2Q9H2S1 579 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 WDR76Q9H967 626 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 MARCH7Q9H992 704 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 SLC17A5Q9NRA2 495 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 HAO2Q9NYQ3 351 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 COMMD3-BMI1R4GMX3 469 aa13.29□□□□□ -0.28
ATG4D-211ENST00000589753 BAHCC1Q9P281 2608 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 ARPC4-TTLL3A0A0A6YYG9 625 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 C12orf71A8MTZ7 269 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 GRNP28799 593 aaKnown RBP13.28□□□□□ -0.28
ATG4D-211ENST00000589753 MTNR1AP48039 350 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 ENTPD1P49961 510 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 NUDT6P53370 316 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 SORDQ00796 357 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 POU4F2Q12837 409 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 ENDOGQ14249 297 aaKnown RBP13.28□□□□□ -0.28
ATG4D-211ENST00000589753 GGTLC2Q14390 218 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 SLC36A2Q495M3 483 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 TIMM23BQ5SRD1 257 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 DPPA2Q7Z7J5 298 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 P2RY8Q86VZ1 359 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 ERI1Q8IV48 349 aaKnown RBP13.28□□□□□ -0.28
ATG4D-211ENST00000589753 TIGD4Q8IY51 512 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 WDR31Q8NA23 367 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 OR52N5Q8NH56 324 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 CNN2Q99439 309 aaKnown RBP13.28□□□□□ -0.28
ATG4D-211ENST00000589753 CDADC1Q9BWV3 514 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 OBP2BQ9NPH6 170 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 KCNG2Q9UJ96 466 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 POLR1DQ9Y2S0 133 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 AMDHD2Q9Y303 409 aa13.28□□□□□ -0.28
ATG4D-211ENST00000589753 RPL36Q9Y3U8 105 aaKnown RBP13.28□□□□□ -0.28
ATG4D-211ENST00000589753 A0A1W2PR80 420 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 ZNF593O00488 134 aaPredicted RBP13.27□□□□□ -0.29
ATG4D-211ENST00000589753 SELENOFO60613 162 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 TMCC2O75069 709 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 UBL3O95164 117 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 HLA-HP01893 362 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 MRPL3P09001 348 aaKnown RBP13.27□□□□□ -0.29
ATG4D-211ENST00000589753 DBTP11182 482 aaKnown RBP13.27□□□□□ -0.29
ATG4D-211ENST00000589753 CD79AP11912 226 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 PPP3CBP16298 524 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 ATP6V1E1P36543 226 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 NAA10P41227 235 aaPredicted RBP13.27□□□□□ -0.29
ATG4D-211ENST00000589753 PCBD1P61457 104 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 TUBA1BP68363 451 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 TUBA4AP68366 448 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 ZNF91Q05481 1191 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 MED21Q13503 144 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 AQP6Q13520 282 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms