RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 TRIM16LQ309B1 348 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 ZMAT1Q5H9K5 638 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 DCAF10Q5QP82 559 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 IDNKQ5T6J7 187 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 LIPNQ5VXI9 398 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 CARD17Q5XLA6 110 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 TMEM225Q6GV28 225 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 MZT2AQ6P582 158 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 Q6ZNX1 250 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 TMPPEQ6ZT21 453 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 YRDCQ86U90 279 aaKnown RBP7.82□□□□□ -1.16
SMAD4-206ENST00000588860 TPRA1Q86W33 373 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 ZNF227Q86WZ6 799 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 TEX19Q8NA77 164 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 OR10H5Q8NGA6 315 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 OR5AK2Q8NH90 309 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 RPS4Y2Q8TD47 263 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 CHPT1Q8WUD6 406 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 HSD17B8Q92506 261 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 NSMAFQ92636 917 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 NKD1Q969G9 470 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 KIAA1143Q96AT1 154 aaPredicted RBP7.82□□□□□ -1.16
SMAD4-206ENST00000588860 IP6K3Q96PC2 410 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 BBC3Q96PG8 261 aaPredicted RBP7.82□□□□□ -1.16
SMAD4-206ENST00000588860 RBP7Q96R05 134 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 OR14A2Q96R54 314 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 OR8B4Q96RC9 309 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 UTP23Q9BRU9 249 aaKnown RBP7.82□□□□□ -1.16
SMAD4-206ENST00000588860 NAA11Q9BSU3 229 aaPredicted RBP7.82□□□□□ -1.16
SMAD4-206ENST00000588860 SCNM1Q9BWG6 230 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 MIXL1Q9H2W2 232 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 ELOVL3Q9HB03 270 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 LRFN1Q9P244 771 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 KLHL13Q9P2N7 655 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 COMMD3Q9UBI1 195 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 BOKQ9UMX3 212 aaPredicted RBP7.82□□□□□ -1.16
SMAD4-206ENST00000588860 RASD1Q9Y272 281 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 ZNF281Q9Y2X9 895 aa7.82□□□□□ -1.16
SMAD4-206ENST00000588860 ARHGAP21Q5T5U3 1957 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 IGHV3-15A0A0B4J1V0 119 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 IGKV1D-43A0A0B4J1Z2 117 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 TRAV1-2A0A0B4J238 106 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 A0A1B0GTH9 108 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 A0A1W2PPK0 400 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 A0A1W2PPL8 197 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 ZNF726A6NNF4 738 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 ZNF879B4DU55 563 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 TNFSF11O14788 317 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 HPGDSO60760 199 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 SC5DO75845 299 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 TRAPPC6AO75865 159 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 ARL6IP5O75915 188 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 UCHL1P09936 223 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 OCM2P0CE71 109 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 OCMP0CE72 109 aaPredicted RBP7.81□□□□□ -1.16
SMAD4-206ENST00000588860 PGA4P0DJD7 388 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 PGA3P0DJD8 388 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 ZNF43P17038 809 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 CFL1P23528 166 aaKnown RBP7.81□□□□□ -1.16
SMAD4-206ENST00000588860 AZGP1P25311 298 aaKnown RBP7.81□□□□□ -1.16
SMAD4-206ENST00000588860 GDF1P27539 372 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 PTGS2P35354 604 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 CD97P48960 835 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 OR10A3P58181 314 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 RPS11P62280 158 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMAD4-206ENST00000588860 RAC1P63000 192 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 CSNK2A1P68400 391 aaPredicted RBP7.81□□□□□ -1.16
SMAD4-206ENST00000588860 SLC17A1Q14916 467 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 HSD17B12Q53GQ0 312 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 YIF1BQ5BJH7 314 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 ATP1A1-AS1Q5TC04 95 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 HBMQ6B0K9 141 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 SPINK14Q6IE38 97 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 KCTD18Q6PI47 426 aaPredicted RBP7.81□□□□□ -1.16
SMAD4-206ENST00000588860 FAM131AQ6UXB0 335 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 LRRN1Q6UXK5 716 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 NHLRC1Q6VVB1 395 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 DCDC5Q6ZRR9 648 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 LINC00696Q6ZRV3 163 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 KRT77Q7Z794 578 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 NR2C2APQ86WQ0 139 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 TMPRSS12Q86WS5 348 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 EGFL6Q8IUX8 553 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 LYSMD2Q8IV50 215 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 LINC00346Q8IVM7 164 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 GLB1L2Q8IW92 636 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 OR8H2Q8N162 312 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 ZNF676Q8N7Q3 588 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 SLC26A10Q8NG04 563 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 OR2G2Q8NGZ5 317 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 OR52N5Q8NH56 324 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 OR6X1Q8NH79 312 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 KCNE4Q8WWG9 221 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 ACOT12Q8WYK0 555 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 RGP1Q92546 391 aaPredicted RBP7.81□□□□□ -1.16
SMAD4-206ENST00000588860 ABTB1Q969K4 478 aaPredicted RBP7.81□□□□□ -1.16
SMAD4-206ENST00000588860 DIRAS2Q96HU8 199 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 MAP6Q96JE9 813 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 COX4I2Q96KJ9 171 aa7.81□□□□□ -1.16
SMAD4-206ENST00000588860 FER1L6-AS2Q96M78 137 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms