RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 ADCK1Q86TW2 530 aa16.6■□□□□ 0.25
CIRBP-217ENST00000588230 ZNF584Q8IVC4 421 aa16.6■□□□□ 0.25
CIRBP-217ENST00000588230 SLC30A7Q8NEW0 376 aa16.6■□□□□ 0.25
CIRBP-217ENST00000588230 OR4C15Q8NGM1 316 aa16.6■□□□□ 0.25
CIRBP-217ENST00000588230 ERMAPQ96PL5 475 aaPredicted RBP16.6■□□□□ 0.25
CIRBP-217ENST00000588230 IFT27Q9BW83 186 aa16.6■□□□□ 0.25
CIRBP-217ENST00000588230 C1orf198Q9H425 327 aa16.6■□□□□ 0.25
CIRBP-217ENST00000588230 SAMHD1Q9Y3Z3 626 aaKnown RBP16.6■□□□□ 0.25
CIRBP-217ENST00000588230 H7C417 338 aa16.59■□□□□ 0.25
CIRBP-217ENST00000588230 MMP7P09237 267 aaPredicted RBP16.59■□□□□ 0.25
CIRBP-217ENST00000588230 LAP3P28838 519 aa16.59■□□□□ 0.25
CIRBP-217ENST00000588230 RASSF2P50749 326 aa16.59■□□□□ 0.25
CIRBP-217ENST00000588230 CLEC12BQ2HXU8 276 aa16.59■□□□□ 0.25
CIRBP-217ENST00000588230 SPATA24Q86W54 205 aa16.59■□□□□ 0.25
CIRBP-217ENST00000588230 ADGRG5Q8IZF4 528 aa16.59■□□□□ 0.25
CIRBP-217ENST00000588230 OR9Q2Q8NGE9 314 aa16.59■□□□□ 0.25
CIRBP-217ENST00000588230 OR1J2Q8NGS2 313 aa16.59■□□□□ 0.25
CIRBP-217ENST00000588230 CANT1Q8WVQ1 401 aa16.59■□□□□ 0.25
CIRBP-217ENST00000588230 SAMD8Q96LT4 415 aa16.59■□□□□ 0.25
CIRBP-217ENST00000588230 CHID1Q9BWS9 393 aa16.59■□□□□ 0.25
CIRBP-217ENST00000588230 SYT4Q9H2B2 425 aa16.59■□□□□ 0.25
CIRBP-217ENST00000588230 LRMDAQ9H2I8 198 aa16.59■□□□□ 0.25
CIRBP-217ENST00000588230 RERGLQ9H628 205 aa16.59■□□□□ 0.25
CIRBP-217ENST00000588230 CDH20Q9HBT6 801 aa16.59■□□□□ 0.25
CIRBP-217ENST00000588230 CMAHPQ9Y471 501 aa16.59■□□□□ 0.25
CIRBP-217ENST00000588230 U3KQV3 271 aa16.59■□□□□ 0.25
CIRBP-217ENST00000588230 DHRS12A0PJE2 317 aa16.58■□□□□ 0.24
CIRBP-217ENST00000588230 IMPA2O14732 288 aa16.58■□□□□ 0.24
CIRBP-217ENST00000588230 GSC2O15499 205 aa16.58■□□□□ 0.24
CIRBP-217ENST00000588230 SLC16A7O60669 478 aa16.58■□□□□ 0.24
CIRBP-217ENST00000588230 KHDRBS3O75525 346 aaKnown RBP16.58■□□□□ 0.24
CIRBP-217ENST00000588230 ATP5HO75947 161 aa16.58■□□□□ 0.24
CIRBP-217ENST00000588230 TXNDC12O95881 172 aa16.58■□□□□ 0.24
CIRBP-217ENST00000588230 CST2P09228 141 aa16.58■□□□□ 0.24
CIRBP-217ENST00000588230 ZNF32P17041 273 aa16.58■□□□□ 0.24
CIRBP-217ENST00000588230 HOXB6P17509 224 aaKnown RBP16.58■□□□□ 0.24
CIRBP-217ENST00000588230 MSR1P21757 451 aa16.58■□□□□ 0.24
CIRBP-217ENST00000588230 EFNB3Q15768 340 aa16.58■□□□□ 0.24
CIRBP-217ENST00000588230 TBC1D28Q2M2D7 210 aa16.58■□□□□ 0.24
CIRBP-217ENST00000588230 PABPC1L2AQ5JQF8 200 aa16.58■□□□□ 0.24
CIRBP-217ENST00000588230 DNM1P46Q6ZS02 220 aa16.58■□□□□ 0.24
CIRBP-217ENST00000588230 FOXL2NBQ6ZUU3 175 aa16.58■□□□□ 0.24
CIRBP-217ENST00000588230 Q71RC1 249 aaPredicted RBP16.58■□□□□ 0.24
CIRBP-217ENST00000588230 CADM1Q9BY67 442 aaKnown RBP16.58■□□□□ 0.24
CIRBP-217ENST00000588230 VSX1Q9NZR4 365 aaPredicted RBP16.58■□□□□ 0.24
CIRBP-217ENST00000588230 POMPQ9Y244 141 aa16.58■□□□□ 0.24
CIRBP-217ENST00000588230 C12orf71A8MTZ7 269 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 ARPC3O15145 178 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 SSX4O60224 188 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 LY6G6DO95868 133 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 CST1P01037 141 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 GASTP01350 101 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 HEXAP06865 529 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 CCL2P13500 99 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 CTLA4P16410 223 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 APEX1P27695 318 aaKnown RBP16.57■□□□□ 0.24
CIRBP-217ENST00000588230 NOS3P29474 1203 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 APLNRP35414 380 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 GLRXP35754 106 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 CDKN2AP42771 156 aaKnown RBP16.57■□□□□ 0.24
CIRBP-217ENST00000588230 NUDT6P53370 316 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 PCBD1P61457 104 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 RPS23P62266 143 aaKnown RBP16.57■□□□□ 0.24
CIRBP-217ENST00000588230 ZNF770Q6IQ21 691 aaPredicted RBP16.57■□□□□ 0.24
CIRBP-217ENST00000588230 RPL13AP3Q6NVV1 102 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 ZNF620Q6ZNG0 422 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 PTCHD4Q6ZW05 846 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 JAZF1Q86VZ6 243 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 AQP11Q8NBQ7 271 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 OR52L1Q8NGH7 329 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 PLK3Q9H4B4 646 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 POLE4Q9NR33 117 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 VNN3Q9NY84 501 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 SLC7A8Q9UHI5 535 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 FBXO9Q9UK97 447 aaPredicted RBP16.57■□□□□ 0.24
CIRBP-217ENST00000588230 TIMM10BQ9Y5J6 103 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 CDH10Q9Y6N8 788 aa16.57■□□□□ 0.24
CIRBP-217ENST00000588230 ANK3Q12955 4377 aaKnown RBP16.56■□□□□ 0.24
CIRBP-217ENST00000588230 GNGT2O14610 69 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 IDH3BO43837 385 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 GPRIN2O60269 458 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 RENP00797 406 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 MICAQ29983 383 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 KRTAP21-3Q3LHN1 58 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 CLEC9AQ6UXN8 241 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 GLB1L2Q8IW92 636 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 ALDH16A1Q8IZ83 802 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 SVOPLQ8N434 492 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 OR4K13Q8NH42 304 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 AKR7LQ8NHP1 331 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 FOXN4Q96NZ1 517 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 VRK1Q99986 396 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-217ENST00000588230 ZNF416Q9BWM5 594 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 OR2H1Q9GZK4 316 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 NUAK2Q9H093 628 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 EGLN3Q9H6Z9 239 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 EMC7Q9NPA0 242 aa16.56■□□□□ 0.24
CIRBP-217ENST00000588230 COA3Q9Y2R0 106 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-217ENST00000588230 SMAD7O15105 426 aaKnown RBP16.55■□□□□ 0.24
CIRBP-217ENST00000588230 SNAP29O95721 258 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms