RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 MOGAT1Q96PD6 335 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 TSPAN32Q96QS1 320 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 ZNF747Q9BV97 191 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 CADM1Q9BY67 442 aaKnown RBP11.56□□□□□ -0.56
SS18-222ENST00000582792 ZNF696Q9H7X3 374 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 NKIRAS2Q9NYR9 191 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 TRRAPQ9Y4A5 3859 aa11.56□□□□□ -0.56
SS18-222ENST00000582792 WNK2Q9Y3S1 2297 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 IGHV1-69-2A0A0G2JMI3 117 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 LRRN3E7EW58 273 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 PLPP3O14495 311 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 ACOT8O14734 319 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 TMPRSS2O15393 492 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 CHP2O43745 196 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 LYPD3O95274 346 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 IFNW1P05000 195 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 FAM157BP0CG42 384 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 ZNF250P15622 560 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 ADRA2CP18825 462 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 AHCYP23526 432 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 GATA3P23771 443 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 UBA52P62987 128 aaKnown RBP11.55□□□□□ -0.56
SS18-222ENST00000582792 GABPB1Q06547 395 aaPredicted RBP11.55□□□□□ -0.56
SS18-222ENST00000582792 LINC00114Q6XXX2 140 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 WDR88Q6ZMY6 472 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 FKBP9P1Q75LS8 142 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 VTCN1Q7Z7D3 282 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 RBM45Q8IUH3 476 aaKnown RBP11.55□□□□□ -0.56
SS18-222ENST00000582792 BPIFB2Q8N4F0 458 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 PAQR4Q8N4S7 273 aaPredicted RBP11.55□□□□□ -0.56
SS18-222ENST00000582792 SLC30A7Q8NEW0 376 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 VANGL1Q8TAA9 524 aaPredicted RBP11.55□□□□□ -0.56
SS18-222ENST00000582792 ZNF519Q8TB69 540 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 SYNPRQ8TBG9 265 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 RNF217Q8TC41 542 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 SNX33Q8WV41 574 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 TMEM54Q969K7 222 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 PRRC1Q96M27 445 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 TMEM43Q9BTV4 400 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 TRIM15Q9C019 465 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 SLCO1C1Q9NYB5 712 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 WIPI2Q9Y4P8 454 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 PCDHGB1Q9Y5G3 927 aa11.55□□□□□ -0.56
SS18-222ENST00000582792 HTR3EA5X5Y0 456 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 AQP12BA6NM10 295 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 CLDN25C9JDP6 229 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 ENTPD5O75356 428 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 SERPINI2O75830 405 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 FSHBP01225 129 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 IGF2P01344 180 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 SEMG1P04279 462 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 OR8G3PP0DMU2 310 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 MSX2P35548 267 aaPredicted RBP11.54□□□□□ -0.56
SS18-222ENST00000582792 RAD52P43351 418 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 CDH12P55289 794 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 BIDP55957 195 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 ERVS71-1P61550 626 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 MS4A2Q01362 244 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 FOXL1Q12952 345 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 SHISA2Q6UWI4 295 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 ASRGL1Q7L266 308 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 AQP12AQ8IXF9 295 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 C10orf53Q8N6V4 93 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 OR6X1Q8NH79 312 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 ADAMTS16Q8TE57 1224 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 C11orf40Q8WZ69 217 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 MCUR1Q96AQ8 359 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 CLPTM1LQ96KA5 538 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 C7orf34Q96L11 122 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 SH3GL3Q99963 347 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 SLC19A3Q9BZV2 496 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 C1orf198Q9H425 327 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 MAGIXQ9H6Y5 334 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 NTN4Q9HB63 628 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 CDH20Q9HBT6 801 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 DDX28Q9NUL7 540 aaKnown RBP11.54□□□□□ -0.56
SS18-222ENST00000582792 TMEM38BQ9NVV0 291 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 GLTPQ9NZD2 209 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 ENPP4Q9Y6X5 453 aa11.54□□□□□ -0.56
SS18-222ENST00000582792 TCRBV5S2A0A599 114 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 CPSF4LA6NMK7 179 aaKnown RBP11.53□□□□□ -0.56
SS18-222ENST00000582792 C11orf98E9PRG8 122 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 PRSS23O95084 383 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 SNAP29O95721 258 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 MT-ATP6P00846 226 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 LCKP06239 509 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 ADORA3P0DMS8 318 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 HKR1P10072 659 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 UMPSP11172 480 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 CCL2P13500 99 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 RHCEP18577 417 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 TNFRSF1BP20333 461 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 ATP6V1B2P21281 511 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 FPR2P25090 351 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 RBM34P42696 430 aaKnown RBP11.53□□□□□ -0.56
SS18-222ENST00000582792 OR1E2P47887 323 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 TAS2R41P59536 307 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 ST3GAL3Q11203 375 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 ZP4Q12836 540 aa11.53□□□□□ -0.56
SS18-222ENST00000582792 HFEQ30201 348 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms