RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 RHCGQ9UBD6 479 aa14.62□□□□□ -0.07
MAP1LC3B-208ENST00000570189 DUSP13Q9UII6 198 aa14.62□□□□□ -0.07
MAP1LC3B-208ENST00000570189 TRAV27A0A087WT01 109 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 A0A1W2PPW3 197 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 CDC42EP2O14613 210 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 RP2O75695 350 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 NCR1O76036 304 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 TGFAP01135 160 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 CD14P08571 375 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 FAM157BP0CG42 384 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 CCL2P13500 99 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 RHCEP18577 417 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 HNF1AP20823 631 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 YAP1P46937 504 aaKnown RBP14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 CDH15P55291 814 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 PSME3P61289 254 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 PSG4Q00888 419 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 TOP3AQ13472 1001 aaPredicted RBP14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 MAD2L1BPQ15013 274 aaPredicted RBP14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 ZBED5Q49AG3 693 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 FAM120AOSQ5T036 256 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 FAM122BQ7Z309 247 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 LINC01356Q8N9X3 169 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 OR51A7Q8NH64 312 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 C7orf34Q96L11 122 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 DHRS1Q96LJ7 313 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 HINT3Q9NQE9 182 aaKnown RBP14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 DCAF13Q9NV06 445 aaKnown RBP14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 TIMM10BQ9Y5J6 103 aa14.61□□□□□ -0.07
MAP1LC3B-208ENST00000570189 LOC100509620A0A075B734 347 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 LRP5LA4QPB2 252 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 SNX3O60493 162 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 CLPTM1O96005 669 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 LCKP06239 509 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 ADH4P08319 380 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 COX5BP10606 129 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 ZNF26P17031 533 aaPredicted RBP14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 MSR1P21757 451 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 COL8A2P25067 703 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 IL2RGP31785 369 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 GUCA1AP43080 201 aaPredicted RBP14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 LIMS1P48059 325 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 NKPD1Q17RQ9 610 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 FAM209AQ5JX71 171 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 MBNL2Q5VZF2 373 aaKnown RBP14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 ALDH16A1Q8IZ83 802 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 OR13C2Q8NGS9 318 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 SNX33Q8WV41 574 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 TMEM158Q8WZ71 300 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 NSMAFQ92636 917 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 FAM162AQ96A26 154 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 MARS2Q96GW9 593 aaKnown RBP14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 ELAC2Q9BQ52 826 aaKnown RBP14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 ZNF416Q9BWM5 594 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 OR2H1Q9GZK4 316 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 NDEL1Q9GZM8 345 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 WNT5BQ9H1J7 359 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 GORASP2Q9H8Y8 452 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 NDUFAF4Q9P032 175 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 TAAR3PQ9P1P4 343 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 CGGBP1Q9UFW8 167 aaPredicted RBP14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 FZR1Q9UM11 496 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 SAMD4AQ9UPU9 718 aaKnown RBP14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 STAB1Q9NY15 2570 aa14.6□□□□□ -0.07
MAP1LC3B-208ENST00000570189 LYNX1G3V0Z9 82 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 PTP4A3O75365 173 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 TFP02787 698 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 H1F0P07305 194 aaKnown RBP14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 LYNX1P0DP58 116 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 NAT2P11245 290 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 SRD5A1P18405 259 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 PCMT1P22061 227 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 TUBG1P23258 451 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 LAP3P28838 519 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 WNT5AP41221 380 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 GPR6P46095 362 aaPredicted RBP14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 DVL1P1P54792 670 aaPredicted RBP14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 ERVS71-1P61550 626 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 ENDOGQ14249 297 aaKnown RBP14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 TRIP10Q15642 601 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 SGCAQ16586 387 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 TBPL2Q6SJ96 375 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 RRM2BQ7LG56 351 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 IGFN1Q86VF2 1251 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 ZNF101Q8IZC7 436 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 CLDN22Q8N7P3 220 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 YIPF5Q969M3 257 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 SNX18Q96RF0 628 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 FUZQ9BT04 418 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 NRIP3Q9NQ35 241 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 POLE4Q9NR33 117 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 TUBG2Q9NRH3 451 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 ZNF275Q9NSD4 429 aaPredicted RBP14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 EIF3KQ9UBQ5 218 aaKnown RBP14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 SIGLEC7Q9Y286 467 aa14.59□□□□□ -0.07
MAP1LC3B-208ENST00000570189 PRSS37A4D1T9 235 aa14.58□□□□□ -0.08
MAP1LC3B-208ENST00000570189 MT-ND5P03915 603 aa14.58□□□□□ -0.08
MAP1LC3B-208ENST00000570189 SEMG1P04279 462 aa14.58□□□□□ -0.08
MAP1LC3B-208ENST00000570189 HSD17B1P14061 328 aa14.58□□□□□ -0.08
MAP1LC3B-208ENST00000570189 NCK1P16333 377 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms