RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ANKDD1AQ495B1 522 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 PAPPA-AS1Q5QFB9 102 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 ELFN2Q5R3F8 820 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 NPSR1Q6W5P4 371 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 ZNF836Q6ZNA1 936 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 MISPQ8IVT2 679 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 C9orf40Q8IXQ3 194 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 ELMOD2Q8IZ81 293 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 MARVELD2Q8N4S9 558 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 BCORP1Q8N888 145 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 ZNF441Q8N8Z8 693 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 ZNF555Q8NEP9 628 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 M1APQ8TC57 530 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 SLC22A8Q8TCC7 542 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 MAGEE2Q8TD90 523 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-222ENST00000570139 RNASE8Q8TDE3 154 aaKnown RBP6.28□□□□□ -1.4
CNOT1-222ENST00000570139 GIPC3Q8TF64 312 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 PIK3R3Q92569 461 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 SLC38A4Q969I6 547 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 ADIPOR1Q96A54 375 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 ZNF559Q9BR84 538 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 ANKRD60Q9BZ19 345 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 EXOSC3Q9NQT5 275 aaKnown RBP6.28□□□□□ -1.4
CNOT1-222ENST00000570139 GSN-AS1Q9NRJ2 163 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 UBQLN4Q9NRR5 601 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 TUBA8Q9NY65 449 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-222ENST00000570139 POFUT2Q9Y2G5 429 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 AP4B1Q9Y6B7 739 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 KCNE3Q9Y6H6 103 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 DNAH14Q0VDD8 3507 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 WDR87Q6ZQQ6 2873 aa6.28□□□□□ -1.4
CNOT1-222ENST00000570139 CABIN1Q9Y6J0 2220 aa6.27□□□□□ -1.4
CNOT1-222ENST00000570139 A0A1W2PPK0 400 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 OR6C70A6NIJ9 312 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 TRIM64CA6NLI5 447 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 PRR32B1ATL7 298 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 NPIPB9F8W1W9 429 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 UGT2B11O75310 529 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 KLF7O75840 302 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-222ENST00000570139 WDPCPO95876 746 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 IRF2P14316 349 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 GSTM3P21266 225 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 TBXA2RP21731 343 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 MPGP29372 298 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 CAPGP40121 348 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 OR1E2P47887 323 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 SLC6A8P48029 635 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 TAS2R41P59536 307 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 RPP38P78345 283 aaKnown RBP6.27□□□□□ -1.41
CNOT1-222ENST00000570139 GALK2Q01415 458 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 MERTKQ12866 999 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 COX10Q12887 443 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 SLC36A3Q495N2 470 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 OTUD3Q5T2D3 398 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-222ENST00000570139 CCNJQ5T5M9 372 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 MRPL2Q5T653 305 aaKnown RBP6.27□□□□□ -1.41
CNOT1-222ENST00000570139 C10orf25Q5T742 122 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 KDM4DQ6B0I6 523 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 FAHD1Q6P587 224 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 ZNF613Q6PF04 617 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 LANCL3Q6ZV70 420 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 MRGPRGQ86SM5 289 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 GLCCI1Q86VQ1 547 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 RAB43Q86YS6 212 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 PRSS58Q8IYP2 241 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 PARP8Q8N3A8 854 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 DHRSXQ8N5I4 330 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 THAP8Q8NA92 274 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 CLEC1AQ8NC01 280 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 APCDD1LQ8NCL9 501 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 DEFB124Q8NES8 71 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 NFAM1Q8NET5 270 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-222ENST00000570139 OR10G2Q8NGC3 310 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 OR4C15Q8NGM1 316 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 OR6T1Q8NGN1 323 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 OR10Q1Q8NGQ4 319 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 PRSS3P2Q8NHM4 247 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 NUDT9Q9BW91 350 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 NMNAT1Q9HAN9 279 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-222ENST00000570139 NOX4Q9NPH5 578 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 PDP1Q9P0J1 537 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-222ENST00000570139 KCNN3Q9UGI6 736 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 UBQLN2Q9UHD9 624 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 MGAT4BQ9UQ53 548 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 HSPE1-MOB4S4R3N1 261 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 GOLGA4Q13439 2230 aaKnown RBP6.27□□□□□ -1.41
CNOT1-222ENST00000570139 ASXL3Q9C0F0 2248 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 VPS13AQ96RL7 3174 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 FER1L5A0AVI2 2057 aa6.27□□□□□ -1.41
CNOT1-222ENST00000570139 KNL1Q8NG31 2342 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 NUP214P35658 2090 aaPredicted RBP6.26□□□□□ -1.41
CNOT1-222ENST00000570139 USP34Q70CQ2 3546 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 WDFY4Q6ZS81 3184 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 IGHV1-45A0A0A0MS14 117 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 NSG1A0A0A6YYJ2 146 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 TRAPPC13A5PLN9 417 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 SERINC4A6NH21 518 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 A8MUA0 341 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 PDLIM1O00151 329 aa6.26□□□□□ -1.41
CNOT1-222ENST00000570139 ADAM10O14672 748 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms