RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 UGT2A3Q6UWM9 527 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 DPPA2Q7Z7J5 298 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 LRRC75A-AS1Q8N1F1 130 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 LRRC18Q8N456 261 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 PAQR4Q8N4S7 273 aaPredicted RBP8.48□□□□□ -1.05
CLK3-220ENST00000567992 NUP37Q8NFH4 326 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 OR4K13Q8NH42 304 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 GIPC3Q8TF64 312 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 TMEM171Q8WVE6 324 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 FOXN4Q96NZ1 517 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 TSSK2Q96PF2 358 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 NMNAT3Q96T66 252 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 DDOQ99489 341 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 FEVQ99581 238 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 ZNF416Q9BWM5 594 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 GSX2Q9BZM3 304 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 GRIP2Q9C0E4 1043 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 NUAK2Q9H093 628 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 EMC7Q9NPA0 242 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 CA10Q9NS85 328 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 ARMC1Q9NVT9 282 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 REV1Q9UBZ9 1251 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 POU2F3Q9UKI9 436 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 ATP23Q9Y6H3 246 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 ARFGEF3Q5TH69 2177 aa8.48□□□□□ -1.05
CLK3-220ENST00000567992 ACANP16112 2415 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 A0A1W2PPL8 197 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 SLC16A7O60669 478 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 SMPD2O60906 423 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 ENTPD5O75356 428 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 GPANK1O95872 356 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 GSTM3P21266 225 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 MSR1P21757 451 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 CDKN1AP38936 164 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 FABP6P51161 128 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 ADAM8P78325 824 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.47□□□□□ -1.05
CLK3-220ENST00000567992 ADIPOQQ15848 244 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 ATP6AP1Q15904 470 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 SGCAQ16586 387 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 MSMPQ1L6U9 139 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 MST1LQ2TV78 715 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 PABPC1L2AQ5JQF8 200 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 OTPQ5XKR4 325 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 TMEM53Q6P2H8 277 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 LEG1Q6P5S2 330 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 SHQ1Q6PI26 577 aaKnown RBP8.47□□□□□ -1.05
CLK3-220ENST00000567992 ZBTB46Q86UZ6 589 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 DEPDC4Q8N2C3 294 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 MUC15Q8N387 334 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 LNX2Q8N448 690 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 NPEPL1Q8NDH3 523 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 CPEB3Q8NE35 698 aaKnown RBP8.47□□□□□ -1.05
CLK3-220ENST00000567992 WFDC11Q8NEX6 87 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 SDR9C7Q8NEX9 313 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 IL17RDQ8NFM7 739 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 OR4F15Q8NGB8 312 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 OR52L1Q8NGH7 329 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 PERPQ96FX8 193 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 WNT5BQ9H1J7 359 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 FN3KQ9H479 309 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 ZNF442Q9H7R0 627 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 YY1AP1Q9H869 796 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 TBC1D23Q9NUY8 699 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 FAIMQ9NVQ4 179 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 PDP1Q9P0J1 537 aaPredicted RBP8.47□□□□□ -1.05
CLK3-220ENST00000567992 FBXL3Q9UKT7 428 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 B9D1Q9UPM9 204 aa8.47□□□□□ -1.05
CLK3-220ENST00000567992 COA3Q9Y2R0 106 aaPredicted RBP8.47□□□□□ -1.05
CLK3-220ENST00000567992 GNGT2O14610 69 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 IDH3BO43837 385 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 GPRIN2O60269 458 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 DEAF1O75398 565 aaPredicted RBP8.46□□□□□ -1.06
CLK3-220ENST00000567992 E2F6O75461 281 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 KHDRBS3O75525 346 aaKnown RBP8.46□□□□□ -1.06
CLK3-220ENST00000567992 MPZL1O95297 269 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 IGHV4-39P01824 125 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 CCL2P13500 99 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 PRKACGP22612 351 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 NR4A1P22736 598 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 APOBEC3AP31941 199 aaPredicted RBP8.46□□□□□ -1.06
CLK3-220ENST00000567992 THBS4P35443 961 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 ACTR3P61158 418 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 PSG4Q00888 419 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 COX10Q12887 443 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 SNTB2Q13425 540 aaKnown RBP8.46□□□□□ -1.06
CLK3-220ENST00000567992 KCNMB1Q16558 191 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 SWI5Q1ZZU3 235 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 SLC36A3Q495N2 470 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 Q5PR19 223 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 SLC35F1Q5T1Q4 408 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 AGAP6Q5VW22 663 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 KRT80Q6KB66 452 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 FAHD1Q6P587 224 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 JAZF1Q86VZ6 243 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 GLB1L2Q8IW92 636 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 OR6V1Q8N148 313 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 IQCF1Q8N6M8 205 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 SLC37A3Q8NCC5 494 aa8.46□□□□□ -1.06
CLK3-220ENST00000567992 SLC30A7Q8NEW0 376 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms