RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 ST3GAL3Q11203 375 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 TOP3AQ13472 1001 aaPredicted RBP10.18□□□□□ -0.78
UBR1-206ENST00000566493 TAF11Q15544 211 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 LRRC23Q53EV4 343 aaPredicted RBP10.18□□□□□ -0.78
UBR1-206ENST00000566493 CYBRD1Q53TN4 286 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 ALG10Q5BKT4 473 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 COQ5Q5HYK3 327 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 ARMC4Q5T2S8 1044 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 C12orf54Q6X4T0 127 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 USP51Q70EK9 711 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 MEX3DQ86XN8 651 aaKnown RBP10.18□□□□□ -0.78
UBR1-206ENST00000566493 C1orf174Q8IYL3 243 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 ALDH16A1Q8IZ83 802 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 PCYOX1LQ8NBM8 494 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 CPEB3Q8NE35 698 aaKnown RBP10.18□□□□□ -0.78
UBR1-206ENST00000566493 FNDC8Q8TC99 324 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 C10orf82Q8WW14 230 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 LZICQ8WZA0 190 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 HDAC2Q92769 488 aaKnown RBP10.18□□□□□ -0.78
UBR1-206ENST00000566493 RAB1CQ92928 201 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 ELMOD3Q96FG2 381 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 TPD52L3Q96J77 140 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 ALG12Q9BV10 488 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 TXNIPQ9H3M7 391 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 ZNF665Q9H7R5 613 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 VIPAS39Q9H9C1 493 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 SAP30LQ9HAJ7 183 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 GID8Q9NWU2 228 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 ANK2Q01484 3957 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 MPZL1O95297 269 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 TSPAN19P0C672 248 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 IFI30P13284 250 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 ARFIP2P53365 341 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 RPL27P61353 136 aaKnown RBP10.17□□□□□ -0.78
UBR1-206ENST00000566493 PCBD1P61457 104 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 FMODQ06828 376 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 KLF10Q13118 480 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 FAM209AQ5JX71 171 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 SPATA46Q5T0L3 261 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 THEM4Q5T1C6 240 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 SLC25A47Q6Q0C1 308 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.17□□□□□ -0.78
UBR1-206ENST00000566493 AKR7LQ8NHP1 331 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 ZFAND2BQ8WV99 257 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 NABP1Q96AH0 204 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 BPIFA2Q96DR5 249 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 ZNF583Q96ND8 569 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 EGLN1Q9GZT9 426 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 CYSLTR2Q9NS75 346 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 HIF3AQ9Y2N7 669 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 UGT2A1Q9Y4X1 527 aa10.17□□□□□ -0.78
UBR1-206ENST00000566493 A0A0G2JMP0 313 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 A0A0X1KG70 313 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 LOC100653049A0A140TA62 436 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 FAM220BPB1ANY3 271 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 FXYD1O00168 92 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 SPRY3O43610 288 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 PIP5K1CO60331 668 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 KRT34O76011 436 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 VENTXO95231 258 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 CST2P09228 141 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 LAP3P28838 519 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 KDELR2P33947 212 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 LIPAP38571 399 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 ARHGDIAP52565 204 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 CTXN1P60606 82 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 ERVK-25P63136 954 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 SELENOWP63302 87 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 PSG4Q00888 419 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 SLC3A1Q07837 685 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 ZMAT1Q5H9K5 638 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 FAM27BQ5VT28 67 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 FAM205BPQ63HN1 556 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 ARL9Q6T311 187 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 PEG10Q86TG7 708 aaKnown RBP10.16□□□□□ -0.78
UBR1-206ENST00000566493 TREML1Q86YW5 311 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 OR2T12Q8NG77 320 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 OR4M2Q8NGB6 313 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 ABHD4Q8TB40 342 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 SLC25A40Q8TBP6 338 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 IPCEF1Q8WWN9 437 aaPredicted RBP10.16□□□□□ -0.78
UBR1-206ENST00000566493 CCL17Q92583 94 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 GTF3AQ92664 365 aaKnown RBP10.16□□□□□ -0.78
UBR1-206ENST00000566493 MARS2Q96GW9 593 aaKnown RBP10.16□□□□□ -0.78
UBR1-206ENST00000566493 POM121L2Q96KW2 1035 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 PRRC1Q96M27 445 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 ELOVL3Q9HB03 270 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 CGGBP1Q9UFW8 167 aaPredicted RBP10.16□□□□□ -0.78
UBR1-206ENST00000566493 PCDHB10Q9UN67 800 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 WIPI2Q9Y4P8 454 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 TIMM10BQ9Y5J6 103 aa10.16□□□□□ -0.78
UBR1-206ENST00000566493 LOC100509620A0A075B734 347 aa10.15□□□□□ -0.78
UBR1-206ENST00000566493 IGKV1D-43A0A0B4J1Z2 117 aa10.15□□□□□ -0.78
UBR1-206ENST00000566493 A0A1W2PPL8 197 aa10.15□□□□□ -0.78
UBR1-206ENST00000566493 ELOVL7A1L3X0 281 aa10.15□□□□□ -0.78
UBR1-206ENST00000566493 A6NIZ1 184 aa10.15□□□□□ -0.78
UBR1-206ENST00000566493 C12orf71A8MTZ7 269 aa10.15□□□□□ -0.78
UBR1-206ENST00000566493 J3QLI3 93 aa10.15□□□□□ -0.78
UBR1-206ENST00000566493 PLPP2O43688 288 aa10.15□□□□□ -0.78
UBR1-206ENST00000566493 RGS9O75916 674 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms