RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 RNF128Q8TEB7 428 aa8.46□□□□□ -1.06
CDH13-205ENST00000562307 C11orf40Q8WZ69 217 aa8.46□□□□□ -1.06
CDH13-205ENST00000562307 FOXN4Q96NZ1 517 aa8.46□□□□□ -1.06
CDH13-205ENST00000562307 ZNF385AQ96PM9 386 aaKnown RBP8.46□□□□□ -1.06
CDH13-205ENST00000562307 SMAD5Q99717 465 aaKnown RBP8.46□□□□□ -1.06
CDH13-205ENST00000562307 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.46□□□□□ -1.06
CDH13-205ENST00000562307 ZDHHC11Q9H8X9 412 aa8.46□□□□□ -1.06
CDH13-205ENST00000562307 SNTG1Q9NSN8 517 aa8.46□□□□□ -1.06
CDH13-205ENST00000562307 PAQR5Q9NXK6 330 aaPredicted RBP8.46□□□□□ -1.06
CDH13-205ENST00000562307 FRRS1LQ9P0K9 344 aa8.46□□□□□ -1.06
CDH13-205ENST00000562307 PLEKHB1Q9UF11 243 aaPredicted RBP8.46□□□□□ -1.06
CDH13-205ENST00000562307 FOXD3Q9UJU5 478 aaPredicted RBP8.46□□□□□ -1.06
CDH13-205ENST00000562307 KLK13Q9UKR3 277 aa8.46□□□□□ -1.06
CDH13-205ENST00000562307 WASF3Q9UPY6 502 aa8.46□□□□□ -1.06
CDH13-205ENST00000562307 RCE1Q9Y256 329 aa8.46□□□□□ -1.06
CDH13-205ENST00000562307 ZNF281Q9Y2X9 895 aa8.46□□□□□ -1.06
CDH13-205ENST00000562307 FLVCR1Q9Y5Y0 555 aa8.46□□□□□ -1.06
CDH13-205ENST00000562307 PEX16Q9Y5Y5 336 aa8.46□□□□□ -1.06
CDH13-205ENST00000562307 KCNMB2Q9Y691 235 aa8.46□□□□□ -1.06
CDH13-205ENST00000562307 IGKV3D-15A0A087WSY6 115 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 IGHV3-15A0A0B4J1V0 119 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 TRAV1-2A0A0B4J238 106 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 SHISA3A0PJX4 238 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 DCDC2BA2VCK2 349 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 CD8B2A6NJW9 211 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 OR4C45A6NMZ5 311 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 FAM166BA8MTA8 275 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 TMCC2O75069 709 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 SRSF10O75494 262 aaKnown RBP8.45□□□□□ -1.06
CDH13-205ENST00000562307 SPARCP09486 303 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 UCHL1P09936 223 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 CLEC2LP0C7M8 214 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 CD8BP10966 210 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 DCTDP32321 178 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 RFC3P40938 356 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 ETV6P41212 452 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 EIF1AXP47813 144 aaKnown RBP8.45□□□□□ -1.06
CDH13-205ENST00000562307 CSNK1A1P48729 337 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 EIF2B1Q14232 305 aaKnown RBP8.45□□□□□ -1.06
CDH13-205ENST00000562307 YIF1BQ5BJH7 314 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 ZMAT1Q5H9K5 638 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 RHOUQ7L0Q8 258 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 CEACAM19Q7Z692 300 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 TPRA1Q86W33 373 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 CROCCP3Q8IVE0 287 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 MEIOBQ8N635 442 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 OR2G2Q8NGZ5 317 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 OR52N5Q8NH56 324 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 RNF133Q8WVZ7 376 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 NSMAFQ92636 917 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 BORCS5Q969J3 196 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 ABTB1Q969K4 478 aaPredicted RBP8.45□□□□□ -1.06
CDH13-205ENST00000562307 PNPLA2Q96AD5 504 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 TMEM45BQ96B21 275 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 DCBLD2Q96PD2 775 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 MROQ9BYG7 248 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 WDR12Q9GZL7 423 aaKnown RBP8.45□□□□□ -1.06
CDH13-205ENST00000562307 PPIL3Q9H2H8 161 aaKnown RBP8.45□□□□□ -1.06
CDH13-205ENST00000562307 SLC6A15Q9H2J7 730 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 ZCCHC4Q9H5U6 513 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 RNF122Q9H9V4 155 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 ELOVL3Q9HB03 270 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 HMG20AQ9NP66 347 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 PALMDQ9NP74 551 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 CRNNQ9UBG3 495 aaPredicted RBP8.45□□□□□ -1.06
CDH13-205ENST00000562307 CYB5R1Q9UHQ9 305 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 ING1Q9UK53 422 aaPredicted RBP8.45□□□□□ -1.06
CDH13-205ENST00000562307 IKZF2Q9UKS7 526 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 UGT2A1Q9Y4X1 527 aa8.45□□□□□ -1.06
CDH13-205ENST00000562307 MED13Q9UHV7 2174 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 TRAV17A0A0B4J275 112 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 TRBV5-5A0A0J9YX44 114 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 ACOT7O00154 380 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 PSMD9O00233 223 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 TAF4O00268 1085 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 DVL2O14641 736 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 CASKO14936 926 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 DHHO43323 396 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 ARL6IP5O75915 188 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 ZFPL1O95159 310 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 IGHG3P01860 377 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 BMP4P12644 408 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 CPN1P15169 458 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 RIDAP52758 137 aaKnown RBP8.44□□□□□ -1.06
CDH13-205ENST00000562307 LSM6P62312 80 aaKnown RBP8.44□□□□□ -1.06
CDH13-205ENST00000562307 RASGEF1BQ0VAM2 473 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 RNFT1Q5M7Z0 435 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 PHYHD1Q5SRE7 291 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 OTPQ5XKR4 325 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 CARD17Q5XLA6 110 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 IGFL3Q6UXB1 125 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 LRRN1Q6UXK5 716 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 LRRC69Q6ZNQ3 347 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 FCRLAQ7L513 359 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 DCXRQ7Z4W1 244 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 KRT77Q7Z794 578 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 CCDC190Q86UF4 302 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 UBQLNLQ8IYU4 475 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 OR10H5Q8NGA6 315 aa8.44□□□□□ -1.06
CDH13-205ENST00000562307 OR6N1Q8NGY5 312 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms