RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ZNF84P51523 738 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 IDH3GP51553 393 aaPredicted RBP8.37□□□□□ -1.07
SRP54-210ENST00000556380 RPS6KA3P51812 740 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 LCN6P62502 163 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 RAB1AP62820 205 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 NAAAQ02083 359 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 HGFACQ04756 655 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 PIGFQ07326 219 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 COX10Q12887 443 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 KRR1Q13601 381 aaKnown RBP8.37□□□□□ -1.07
SRP54-210ENST00000556380 ETFDHQ16134 617 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 GSG1Q2KHT4 349 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 PGGHGQ32M88 737 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 XP32Q5T750 250 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 FAM27BQ5VT28 67 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 ZNF584Q8IVC4 421 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 NPEPL1Q8NDH3 523 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 NRBF2Q96F24 287 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 ERMAPQ96PL5 475 aaPredicted RBP8.37□□□□□ -1.07
SRP54-210ENST00000556380 FOXC2Q99958 501 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 CXXC4Q9H2H0 198 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 CISD1Q9NZ45 108 aaKnown RBP8.37□□□□□ -1.07
SRP54-210ENST00000556380 EDARQ9UNE0 448 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 ZNF469Q96JG9 3925 aaPredicted RBP8.36□□□□□ -1.07
SRP54-210ENST00000556380 DSCAMO60469 2012 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 IGHV2OR16-5A0A0B4J2B6 119 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 ATP6V1G2-DDX39BF2Z307 99 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 DCTN6O00399 190 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 SOCS2O14508 198 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 XKRYO14609 159 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 ENTPD5O75356 428 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 DEAF1O75398 565 aaPredicted RBP8.36□□□□□ -1.07
SRP54-210ENST00000556380 UBL3O95164 117 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 SERPINA5P05154 406 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 SOD3P08294 240 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 ZNF35P13682 527 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 PAX1P15863 534 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 HIST1H1CP16403 213 aaKnown RBP8.36□□□□□ -1.07
SRP54-210ENST00000556380 PRKACGP22612 351 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 CAPZA2P47755 286 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 CDH11P55287 796 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 ACTR3P61158 418 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 KEAP1Q14145 624 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 DOC2BQ14184 412 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 ATP6AP1Q15904 470 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 DEFB113Q30KQ7 82 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 CLEC12AQ5QGZ9 265 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 RPL13AP3Q6NVV1 102 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 SHQ1Q6PI26 577 aaKnown RBP8.36□□□□□ -1.07
SRP54-210ENST00000556380 SLC22A25Q6T423 547 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 UGT2A3Q6UWM9 527 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 DPPA2Q7Z7J5 298 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 DTX2Q86UW9 622 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 LNX2Q8N448 690 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 IL17RDQ8NFM7 739 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 OR4Q3Q8NH05 313 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 OR4K13Q8NH42 304 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 SMAP2Q8WU79 429 aaPredicted RBP8.36□□□□□ -1.07
SRP54-210ENST00000556380 PIGTQ969N2 578 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 FBXW5Q969U6 566 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 FBXO17Q96EF6 278 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 SNX18Q96RF0 628 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 DHRS9Q9BPW9 319 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 IFT27Q9BW83 186 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 NUAK2Q9H093 628 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 SYT4Q9H2B2 425 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 POLE4Q9NR33 117 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 ZNF701Q9NV72 531 aaPredicted RBP8.36□□□□□ -1.07
SRP54-210ENST00000556380 BEX4Q9NWD9 120 aaPredicted RBP8.36□□□□□ -1.07
SRP54-210ENST00000556380 PDP1Q9P0J1 537 aaPredicted RBP8.36□□□□□ -1.07
SRP54-210ENST00000556380 MOKQ9UQ07 419 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 AP4S1Q9Y587 144 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 ZANQ9Y493 2812 aa8.36□□□□□ -1.07
SRP54-210ENST00000556380 IGLV1-36A0A0B4J1U3 117 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 OR6C68A6NDL8 312 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 GNGT2O14610 69 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 SLC16A7O60669 478 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 TMCC2O75069 709 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 KHDRBS3O75525 346 aaKnown RBP8.35□□□□□ -1.07
SRP54-210ENST00000556380 CIB2O75838 187 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 FARS2O95363 451 aaKnown RBP8.35□□□□□ -1.07
SRP54-210ENST00000556380 CRYAAP02489 173 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 CST2P09228 141 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 LAP3P28838 519 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 TTKP33981 857 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 PTDSS1P48651 473 aaKnown RBP8.35□□□□□ -1.07
SRP54-210ENST00000556380 NKX6-1P78426 367 aaPredicted RBP8.35□□□□□ -1.07
SRP54-210ENST00000556380 DBPQ10586 325 aaPredicted RBP8.35□□□□□ -1.07
SRP54-210ENST00000556380 ENDOGQ14249 297 aaKnown RBP8.35□□□□□ -1.07
SRP54-210ENST00000556380 RAB39AQ14964 217 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 KPNB1Q14974 876 aaKnown RBP8.35□□□□□ -1.07
SRP54-210ENST00000556380 KCNMB1Q16558 191 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 SGCAQ16586 387 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 MST1LQ2TV78 715 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 SLC35F1Q5T1Q4 408 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 C11orf71Q6IPW1 123 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 FAHD1Q6P587 224 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 C8orf86Q6ZUL3 223 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 SLC16A14Q7RTX9 510 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 YTHDF3Q7Z739 585 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms