RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ZNF175Q9Y473 711 aa12.8□□□□□ -0.36
SHMT2-208ENST00000553868 SLC35F4A4IF30 521 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 H7C1C5 153 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 MYL12BO14950 172 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 SLC16A7O60669 478 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 RAMP1O60894 148 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 KHDRBS3O75525 346 aaKnown RBP12.79□□□□□ -0.36
SHMT2-208ENST00000553868 TFAP2AP05549 437 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 GYPBP06028 91 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 CLUP10909 449 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 LCN6P62502 163 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 NEDD8Q15843 81 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 ZBTB46Q86UZ6 589 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 CDC20BQ86Y33 519 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 RPRMLQ8N4K4 120 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 ACBD7Q8N6N7 88 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 OR51G2Q8NGK0 314 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 RNF128Q8TEB7 428 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 ROBO4Q8WZ75 1007 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 RORBQ92753 470 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 KISS1RQ969F8 398 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-208ENST00000553868 ZNF845Q96IR2 970 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-208ENST00000553868 MNTQ99583 582 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 TUBA1CQ9BQE3 449 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 JAM3Q9BX67 310 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 NUAK2Q9H093 628 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 RACGAP1Q9H0H5 632 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 RERGLQ9H628 205 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 RNF122Q9H9V4 155 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 GP6Q9HCN6 339 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 NDUFA13Q9P0J0 144 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 B9D1Q9UPM9 204 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 NCKAP5O14513 1909 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 ANK2Q01484 3957 aa12.79□□□□□ -0.36
SHMT2-208ENST00000553868 IGKV3D-15A0A087WSY6 115 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 ZNF716A6NP11 495 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 PRRG2O14669 202 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 SLC43A1O75387 559 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 IGHA1P01876 353 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 SBK2P0C263 348 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 PGA4P0DJD7 388 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 PGA3P0DJD8 388 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 C21orf33P30042 268 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-208ENST00000553868 PYCR1P32322 319 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 ALDH3B2P48448 385 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 CSNK1A1P48729 337 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 EMX1Q04741 257 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-208ENST00000553868 GLO1Q04760 184 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 CAMK2DQ13557 499 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 IRF3Q14653 427 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 B3GNT6Q6ZMB0 384 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 OR6V1Q8N148 313 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 SYT14Q8NB59 555 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 OR6N1Q8NGY5 312 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 ZPLD1Q8TCW7 415 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 TMEM45BQ96B21 275 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 ZMYND19Q96E35 227 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-208ENST00000553868 EMC6Q9BV81 110 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 MND1Q9BWT6 205 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 MRPL13Q9BYD1 178 aaKnown RBP12.78□□□□□ -0.36
SHMT2-208ENST00000553868 ACOT13Q9NPJ3 140 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 B3GAT2Q9NPZ5 323 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 PARPBPQ9NWS1 579 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 FLVCR1Q9Y5Y0 555 aa12.78□□□□□ -0.36
SHMT2-208ENST00000553868 DAPL1A0PJW8 107 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 OR6C65A6NJZ3 312 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 SLC22A20A6NK97 555 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 ZNF724A8MTY0 619 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 FAM171A2A8MVW0 826 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 ZNF99A8MXY4 864 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-208ENST00000553868 ATE1O95260 518 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 HLA-DQA2P01906 255 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 OR2T7P0C7T2 308 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 PCMT1P22061 227 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 CHRNB4P30926 498 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 CAPZA2P47755 286 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 HSF2Q03933 536 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 RUNX1T1Q06455 604 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 LINC01590Q5TEZ4 76 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 PAMR1Q6UXH9 720 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 TMPRSS11AQ6ZMR5 421 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 ZNF367Q7RTV3 350 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 AAED1Q7RTV5 226 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 SLC16A9Q7RTY1 509 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 P4HA3Q7Z4N8 544 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 GPR141Q7Z602 305 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 OR10H4Q8NGA5 316 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 OR4F15Q8NGB8 312 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 OR51L1Q8NGJ5 315 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 OR2T27Q8NH04 317 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 ASB5Q8WWX0 329 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 TSSK2Q96PF2 358 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 OR2M2Q96R28 347 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 YIPF3Q9GZM5 350 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 ADGRL4Q9HBW9 690 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 GLRX2Q9NS18 164 aa12.77□□□□□ -0.37
SHMT2-208ENST00000553868 IGLV1-36A0A0B4J1U3 117 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 A0A1B0GTH9 108 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 TMEM129A0AVI4 362 aa12.76□□□□□ -0.37
SHMT2-208ENST00000553868 C12orf71A8MTZ7 269 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms