RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 OVOL3O00110 214 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 SLC16A7O60669 478 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 WDR1O75083 606 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 MRPL33O75394 65 aaKnown RBP4.44□□□□□ -1.7
VTI1B-202ENST00000553619 WBP4O75554 376 aaKnown RBP4.44□□□□□ -1.7
VTI1B-202ENST00000553619 KRT33AO76009 404 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 SLC2A10O95528 541 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 RAB36O95755 333 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 IL18BPO95998 194 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 PLGP00747 810 aaPredicted RBP4.44□□□□□ -1.7
VTI1B-202ENST00000553619 HLA-DQA2P01906 255 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 CDK1P06493 297 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 CRHP06850 196 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 YES1P07947 543 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 OR2T7P0C7T2 308 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 DBTP11182 482 aaKnown RBP4.44□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF823P16415 610 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 ABOP16442 354 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 SPI1P17947 270 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 MYL12AP19105 171 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 SHC1P29353 583 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 CDKN2AP42771 156 aaKnown RBP4.44□□□□□ -1.7
VTI1B-202ENST00000553619 RPL5P46777 297 aaKnown RBP4.44□□□□□ -1.7
VTI1B-202ENST00000553619 CSNK1A1P48729 337 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF84P51523 738 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 P2RY4P51582 365 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 NR1H2P55055 460 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 CASP6P55212 293 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 ACTC1P68032 377 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 ACTA1P68133 377 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 PMP22Q01453 160 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 HSF2Q03933 536 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 GLO1Q04760 184 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 ST3GAL4Q11206 333 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 APOFQ13790 326 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 CRMP1Q14194 572 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 STK11Q15831 433 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 GXYLT1Q4G148 440 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF362Q5T0B9 420 aaPredicted RBP4.44□□□□□ -1.7
VTI1B-202ENST00000553619 RNLSQ5VYX0 342 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 TMEM211Q6ICI0 200 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 NIPAL3Q6P499 406 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 TMEM154Q6P9G4 183 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 TMPRSS11AQ6ZMR5 421 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 AAED1Q7RTV5 226 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 KCTD20Q7Z5Y7 419 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 IGFN1Q86VF2 1251 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 ANKRD13BQ86YJ7 626 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 CCDC71Q8IV32 467 aaPredicted RBP4.44□□□□□ -1.7
VTI1B-202ENST00000553619 SIAH3Q8IW03 269 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 KDM8Q8N371 416 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 GPR137CQ8N3F9 429 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 ACBD7Q8N6N7 88 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 POMGNT2Q8NAT1 580 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 DRAXINQ8NBI3 349 aaPredicted RBP4.44□□□□□ -1.7
VTI1B-202ENST00000553619 SDR9C7Q8NEX9 313 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 PROKR2Q8NFJ6 384 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 OR10H5Q8NGA6 315 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 OR9K2Q8NGE7 335 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 OR6N1Q8NGY5 312 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 OR2T27Q8NH04 317 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF519Q8TB69 540 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 HAVCR2Q8TDQ0 301 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 APH1BQ8WW43 257 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 ASB10Q8WXI3 467 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 ROBO4Q8WZ75 1007 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 RORBQ92753 470 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 TMEM45BQ96B21 275 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 RNFT2Q96EX2 444 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 GMPPAQ96IJ6 420 aaPredicted RBP4.44□□□□□ -1.7
VTI1B-202ENST00000553619 GPR137Q96N19 417 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 ZFP3Q96NJ6 502 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 TSPAN32Q96QS1 320 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 OR14A2Q96R54 314 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 DDOQ99489 341 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 WACQ9BTA9 647 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 CDCA4Q9BXL8 241 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 NMNAT2Q9BZQ4 307 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 YIPF3Q9GZM5 350 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 RACGAP1Q9H0H5 632 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 AMBNQ9NP70 447 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 FGF20Q9NP95 211 aaPredicted RBP4.44□□□□□ -1.7
VTI1B-202ENST00000553619 HINT3Q9NQE9 182 aaKnown RBP4.44□□□□□ -1.7
VTI1B-202ENST00000553619 RPRD1BQ9NQG5 326 aaKnown RBP4.44□□□□□ -1.7
VTI1B-202ENST00000553619 GLTPQ9NZD2 209 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 DNAJC27Q9NZQ0 273 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 UPB1Q9UBR1 384 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 B9D1Q9UPM9 204 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 GPR52Q9Y2T5 361 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 NOSIPQ9Y314 301 aaKnown RBP4.44□□□□□ -1.7
VTI1B-202ENST00000553619 EXOSC1Q9Y3B2 195 aaKnown RBP4.44□□□□□ -1.7
VTI1B-202ENST00000553619 ADAM18Q9Y3Q7 739 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 CSAG2Q9Y5P2 127 aa4.44□□□□□ -1.7
VTI1B-202ENST00000553619 IGHV3-15A0A0B4J1V0 119 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 DAPL1A0PJW8 107 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 OR6C68A6NDL8 312 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 TRIM64A6NGJ6 449 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 CD8B2A6NJW9 211 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 FAM183AA6NL82 134 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 FAM90A27PA6NNH2 459 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms