RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 SOX2P48431 317 aa7.39□□□□□ -1.23
RAB5B-210ENST00000553116 RIDAP52758 137 aaKnown RBP7.39□□□□□ -1.23
RAB5B-210ENST00000553116 ALKBH1Q13686 389 aaKnown RBP7.39□□□□□ -1.23
RAB5B-210ENST00000553116 HSD17B12Q53GQ0 312 aa7.39□□□□□ -1.23
RAB5B-210ENST00000553116 ZNF544Q6NX49 715 aa7.39□□□□□ -1.23
RAB5B-210ENST00000553116 NOXO1Q8NFA2 376 aa7.39□□□□□ -1.23
RAB5B-210ENST00000553116 ADAMTS17Q8TE56 1095 aa7.39□□□□□ -1.23
RAB5B-210ENST00000553116 ASB17Q8WXJ9 295 aa7.39□□□□□ -1.23
RAB5B-210ENST00000553116 SLC25A44Q96H78 314 aaPredicted RBP7.39□□□□□ -1.23
RAB5B-210ENST00000553116 SIGLEC12Q96PQ1 595 aa7.39□□□□□ -1.23
RAB5B-210ENST00000553116 AMELYQ99218 206 aa7.39□□□□□ -1.23
RAB5B-210ENST00000553116 IRF2BPLQ9H1B7 796 aa7.39□□□□□ -1.23
RAB5B-210ENST00000553116 CENPMQ9NSP4 180 aa7.39□□□□□ -1.23
RAB5B-210ENST00000553116 DEPPQ9NTK1 212 aa7.39□□□□□ -1.23
RAB5B-210ENST00000553116 SLCO1C1Q9NYB5 712 aa7.39□□□□□ -1.23
RAB5B-210ENST00000553116 ZNF281Q9Y2X9 895 aa7.39□□□□□ -1.23
RAB5B-210ENST00000553116 ACOD1A6NK06 481 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 ZNF879B4DU55 563 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 TRAF3IP2O43734 574 aaPredicted RBP7.38□□□□□ -1.23
RAB5B-210ENST00000553116 ZFPL1O95159 310 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 ZNF12P17014 697 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 GUCA1AP43080 201 aaPredicted RBP7.38□□□□□ -1.23
RAB5B-210ENST00000553116 NANOS3P60323 173 aaKnown RBP7.38□□□□□ -1.23
RAB5B-210ENST00000553116 MRPL28Q13084 256 aaKnown RBP7.38□□□□□ -1.23
RAB5B-210ENST00000553116 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.38□□□□□ -1.23
RAB5B-210ENST00000553116 GLB1L2Q8IW92 636 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 GALNT16Q8N428 558 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 OR6N1Q8NGY5 312 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 HAVCR2Q8TDQ0 301 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 TSEN15Q8WW01 171 aaKnown RBP7.38□□□□□ -1.23
RAB5B-210ENST00000553116 HTRA1Q92743 480 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 UCN2Q96RP3 112 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 HES7Q9BYE0 225 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.38□□□□□ -1.23
RAB5B-210ENST00000553116 PPIL3Q9H2H8 161 aaKnown RBP7.38□□□□□ -1.23
RAB5B-210ENST00000553116 QPCTLQ9NXS2 382 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 MALT1Q9UDY8 824 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 ADAM30Q9UKF2 790 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 RASD1Q9Y272 281 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 KIAA1549Q9HCM3 1950 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 IGKV1D-43A0A0B4J1Z2 117 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 A0A0J9YW62 118 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 A0A1B0GTH9 108 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 FABP12A6NFH5 140 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 LRRC3CA6NJW4 275 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 FAM166BA8MTA8 275 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 H0YC42 278 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 RAB3BP20337 219 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 CNR1P21554 472 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 CLDN20P56880 219 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 OR10A3P58181 314 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 YIF1BQ5BJH7 314 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 THEM4Q5T1C6 240 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 HBMQ6B0K9 141 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 CORO6Q6QEF8 472 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 DCXRQ7Z4W1 244 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 WDFY1Q8IWB7 410 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 ZNF433Q8N7K0 673 aaPredicted RBP7.38□□□□□ -1.23
RAB5B-210ENST00000553116 OR8B4Q96RC9 309 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 CITED4Q96RK1 184 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 FAM173AQ9BQD7 235 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 MFRPQ9BY79 579 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 SLC25A18Q9H1K4 315 aa7.38□□□□□ -1.23
RAB5B-210ENST00000553116 ZNF407Q9C0G0 2248 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 HPGDSO60760 199 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 UPK1BO75841 260 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 PSKH1P11801 424 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 CFL1P23528 166 aaKnown RBP7.37□□□□□ -1.23
RAB5B-210ENST00000553116 STARP49675 285 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 PPP3R1P63098 170 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 ARG2P78540 354 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 AGAP7PQ5VUJ5 663 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 SYT9Q86SS6 491 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 CCDC190Q86UF4 302 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 ZNF679Q8IYX0 411 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 ZNF454Q8N9F8 522 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 SLC26A10Q8NG04 563 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 OR52N5Q8NH56 324 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 KCNE4Q8WWG9 221 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 ZNF775Q96BV0 537 aaPredicted RBP7.37□□□□□ -1.23
RAB5B-210ENST00000553116 AGAP4Q96P64 663 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 ABHD6Q9BV23 337 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 SLITRK2Q9H156 845 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 NOX4Q9NPH5 578 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 BRD7Q9NPI1 651 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 C14orf119Q9NWQ9 140 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 PINLYPA6NC86 204 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 UPK3AO75631 287 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 GATBO75879 557 aaKnown RBP7.37□□□□□ -1.23
RAB5B-210ENST00000553116 NEURL1O76050 574 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 NR2C1P13056 603 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 NBL1P41271 181 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 MAGEB1P43366 347 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 CSNK1A1P48729 337 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 RRADP55042 308 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 CARD18P57730 90 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 RASGEF1BQ0VAM2 473 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 SLC17A1Q14916 467 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 SFXN4Q6P4A7 337 aa7.37□□□□□ -1.23
RAB5B-210ENST00000553116 TPRA1Q86W33 373 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms