RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 KCTD14Q9BQ13 255 aaPredicted RBP8.02□□□□□ -1.13
YBX3-218ENST00000546298 OR51B6Q9H340 312 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 DECR2Q9NUI1 292 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 MYEF2Q9P2K5 600 aaKnown RBP8.02□□□□□ -1.13
YBX3-218ENST00000546298 RHCGQ9UBD6 479 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 GRHPRQ9UBQ7 328 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 RPS6KA6Q9UK32 745 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 TMEM5Q9Y2B1 443 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 UGT2A1Q9Y4X1 527 aa8.02□□□□□ -1.13
YBX3-218ENST00000546298 ARFGEF3Q5TH69 2177 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 A0A087WUU8 490 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 PLSCR5A0PG75 271 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 C5orf49A4QMS7 147 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 C12orf71A8MTZ7 269 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 NME4O00746 187 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 XKRYO14609 159 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 FFAR1O14842 300 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 TPD52L2O43399 206 aaKnown RBP8.01□□□□□ -1.13
YBX3-218ENST00000546298 PPIHO43447 177 aaKnown RBP8.01□□□□□ -1.13
YBX3-218ENST00000546298 CLPTM1O96005 669 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 SERPINA1P01009 418 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 IGHV3-13P01766 116 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 CD14P08571 375 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 ANPEPP15144 967 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 MSR1P21757 451 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 LIPAP38571 399 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 GSK3BP49841 420 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 NUDT2P50583 147 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 ARHGDIAP52565 204 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 PSG4Q00888 419 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 FMODQ06828 376 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 TRIP10Q15642 601 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 ALKBH6Q3KRA9 238 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 ZBED5Q49AG3 693 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 TMPRSS11FQ6ZWK6 438 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 MBOAT2Q6ZWT7 520 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 ZER1Q7Z7L7 766 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 SYT9Q86SS6 491 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 GLCCI1Q86VQ1 547 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 LRRC75AQ8NAA5 344 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 FAM156AQ8NDB6 213 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 CPEB3Q8NE35 698 aaKnown RBP8.01□□□□□ -1.13
YBX3-218ENST00000546298 CLDND2Q8NHS1 167 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 NABP1Q96AH0 204 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 POM121L2Q96KW2 1035 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 REPIN1Q9BWE0 567 aaKnown RBP8.01□□□□□ -1.13
YBX3-218ENST00000546298 OR2H1Q9GZK4 316 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 NMNAT1Q9HAN9 279 aaPredicted RBP8.01□□□□□ -1.13
YBX3-218ENST00000546298 ELOVL3Q9HB03 270 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 KRCC1Q9NPI7 259 aaPredicted RBP8.01□□□□□ -1.13
YBX3-218ENST00000546298 CYSLTR2Q9NS75 346 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 ZNF275Q9NSD4 429 aaPredicted RBP8.01□□□□□ -1.13
YBX3-218ENST00000546298 MAN2C1Q9NTJ4 1040 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 NDRG4Q9ULP0 352 aaKnown RBP8.01□□□□□ -1.13
YBX3-218ENST00000546298 GRIP1Q9Y3R0 1128 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 SNX13Q9Y5W8 968 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 ENPP4Q9Y6X5 453 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 CHD3Q12873 2000 aaKnown RBP8.01□□□□□ -1.13
YBX3-218ENST00000546298 RTTNQ86VV8 2226 aa8.01□□□□□ -1.13
YBX3-218ENST00000546298 TRAV27A0A087WT01 109 aa8□□□□□ -1.13
YBX3-218ENST00000546298 IGKV1D-43A0A0B4J1Z2 117 aa8□□□□□ -1.13
YBX3-218ENST00000546298 A0A1W2PPL8 197 aa8□□□□□ -1.13
YBX3-218ENST00000546298 H3BSA7 217 aa8□□□□□ -1.13
YBX3-218ENST00000546298 J3KTA2 159 aa8□□□□□ -1.13
YBX3-218ENST00000546298 ATP8B1O43520 1251 aa8□□□□□ -1.13
YBX3-218ENST00000546298 H1F0P07305 194 aaKnown RBP8□□□□□ -1.13
YBX3-218ENST00000546298 TUBG1P23258 451 aa8□□□□□ -1.13
YBX3-218ENST00000546298 LAP3P28838 519 aa8□□□□□ -1.13
YBX3-218ENST00000546298 PRDX6P30041 224 aa8□□□□□ -1.13
YBX3-218ENST00000546298 IL2RGP31785 369 aa8□□□□□ -1.13
YBX3-218ENST00000546298 CRYBB2P43320 205 aa8□□□□□ -1.13
YBX3-218ENST00000546298 MAGEB1P43366 347 aa8□□□□□ -1.13
YBX3-218ENST00000546298 ZNF81P51508 661 aa8□□□□□ -1.13
YBX3-218ENST00000546298 PSME3P61289 254 aa8□□□□□ -1.13
YBX3-218ENST00000546298 ERVS71-1P61550 626 aa8□□□□□ -1.13
YBX3-218ENST00000546298 ERVK-25P63136 954 aa8□□□□□ -1.13
YBX3-218ENST00000546298 CCL8P80075 99 aa8□□□□□ -1.13
YBX3-218ENST00000546298 SCGB2A2Q13296 93 aa8□□□□□ -1.13
YBX3-218ENST00000546298 CCNIQ14094 377 aa8□□□□□ -1.13
YBX3-218ENST00000546298 KRT72Q14CN4 511 aa8□□□□□ -1.13
YBX3-218ENST00000546298 ZMAT1Q5H9K5 638 aa8□□□□□ -1.13
YBX3-218ENST00000546298 GPR139Q6DWJ6 353 aa8□□□□□ -1.13
YBX3-218ENST00000546298 GLYATQ6IB77 296 aa8□□□□□ -1.13
YBX3-218ENST00000546298 C8orf82Q6P1X6 216 aaPredicted RBP8□□□□□ -1.13
YBX3-218ENST00000546298 FOXL2NBQ6ZUU3 175 aa8□□□□□ -1.13
YBX3-218ENST00000546298 IL17RELQ6ZVW7 336 aa8□□□□□ -1.13
YBX3-218ENST00000546298 IGFN1Q86VF2 1251 aa8□□□□□ -1.13
YBX3-218ENST00000546298 PHC2Q8IXK0 858 aa8□□□□□ -1.13
YBX3-218ENST00000546298 TEX29Q8N6K0 151 aa8□□□□□ -1.13
YBX3-218ENST00000546298 OR13C2Q8NGS9 318 aa8□□□□□ -1.13
YBX3-218ENST00000546298 AKR7LQ8NHP1 331 aa8□□□□□ -1.13
YBX3-218ENST00000546298 YIPF5Q969M3 257 aa8□□□□□ -1.13
YBX3-218ENST00000546298 ELMOD3Q96FG2 381 aa8□□□□□ -1.13
YBX3-218ENST00000546298 TIMD4Q96H15 378 aa8□□□□□ -1.13
YBX3-218ENST00000546298 TSPAN32Q96QS1 320 aa8□□□□□ -1.13
YBX3-218ENST00000546298 ELAC2Q9BQ52 826 aaKnown RBP8□□□□□ -1.13
YBX3-218ENST00000546298 SOX7Q9BT81 388 aa8□□□□□ -1.13
YBX3-218ENST00000546298 RACGAP1Q9H0H5 632 aa8□□□□□ -1.13
YBX3-218ENST00000546298 SPAG4Q9NPE6 437 aa8□□□□□ -1.13
YBX3-218ENST00000546298 POLE4Q9NR33 117 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms