RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 P2RX4Q99571 388 aa1.48□□□□□ -2.17
CCDC170-203ENST00000544131 CHAC1Q9BUX1 264 aa1.48□□□□□ -2.17
CCDC170-203ENST00000544131 RPF2Q9H7B2 306 aaKnown RBP1.48□□□□□ -2.17
CCDC170-203ENST00000544131 C12orf10Q9HB07 376 aa1.48□□□□□ -2.17
CCDC170-203ENST00000544131 EXTL2Q9UBQ6 330 aa1.48□□□□□ -2.17
CCDC170-203ENST00000544131 SHROOM3Q8TF72 1996 aa1.48□□□□□ -2.17
CCDC170-203ENST00000544131 FCGBPQ9Y6R7 5405 aaPredicted RBP1.48□□□□□ -2.17
CCDC170-203ENST00000544131 SDK2Q58EX2 2172 aa1.48□□□□□ -2.17
CCDC170-203ENST00000544131 WDR62O43379 1518 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 TRAV39A0A0B4J263 110 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 A0A1W2PPE3 182 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 A0A1W2PPV9 198 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 PCNX2A6NKB5 2137 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 A8MUU9 505 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 CXCL11O14625 94 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 GABARAPO95166 117 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 CDRT1O95170 752 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 SLC25A14O95258 325 aaPredicted RBP1.47□□□□□ -2.17
CCDC170-203ENST00000544131 FGGP02679 453 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 SERPIND1P05546 499 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 MCF2P10911 925 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 FOLR1P15328 257 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 NCF2P19878 526 aaPredicted RBP1.47□□□□□ -2.17
CCDC170-203ENST00000544131 KITLGP21583 273 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 CASP14P31944 242 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 CRYBB2P43320 205 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 NUTF2P61970 127 aaKnown RBP1.47□□□□□ -2.17
CCDC170-203ENST00000544131 MRPS22P82650 360 aaKnown RBP1.47□□□□□ -2.17
CCDC170-203ENST00000544131 PITPNAQ00169 270 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 ECH1Q13011 328 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 ERCC8Q13216 396 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 SLC39A6Q13433 755 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 CLINT1Q14677 625 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 IRF4Q15306 451 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 POU2AF1Q16633 256 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 NTM-AS1Q6ZSK4 140 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 SLC25A48Q6ZT89 311 aaKnown RBP1.47□□□□□ -2.17
CCDC170-203ENST00000544131 WDR86Q86TI4 376 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 STPG2Q8N412 459 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 EID2Q8N6I1 236 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 HSD17B11Q8NBQ5 300 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 OR2L3Q8NG85 312 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 OR4S2Q8NH73 311 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 RHEBL1Q8TAI7 183 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 CXorf40AQ8TE69 158 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 RNF139Q8WU17 664 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 PIBF1Q8WXW3 757 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 FAM3DQ96BQ1 224 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 L3HYPDHQ96EM0 354 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 PIK3IP1Q96FE7 263 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 WFIKKN1Q96NZ8 548 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 TCHPQ9BT92 498 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 MRPL37Q9BZE1 423 aaKnown RBP1.47□□□□□ -2.17
CCDC170-203ENST00000544131 GPATCH2LQ9NWQ4 482 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 KLHL28Q9NXS3 571 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 COX16Q9P0S2 106 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 CTNNA3Q9UI47 895 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 NUP50Q9UKX7 468 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 RABL2BQ9UNT1 228 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 MRPS18BQ9Y676 258 aaKnown RBP1.47□□□□□ -2.17
CCDC170-203ENST00000544131 ATAD2BQ9ULI0 1458 aa1.47□□□□□ -2.17
CCDC170-203ENST00000544131 IGLV1-50A0A075B6I6 118 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 IGHV3-74A0A0B4J1X5 117 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 IGHV5-10-1A0A0J9YXX1 117 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 TMEM223A0PJW6 202 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 TRIM64CA6NLI5 447 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 F6UB75 175 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 RAD51BO15315 384 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 CCNKO75909 580 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 UTS2O95399 124 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 RAB3DO95716 219 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 SERPINA3P01011 423 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 IL4P05112 153 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 GNAO1P09471 354 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 IGHV1-8P0DP01 117 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 HRH1P35367 487 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 CEACAM6P40199 344 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 CDKN2BP42772 138 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 NAMPTP43490 491 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 RFX3P48380 749 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 CSNK1A1P48729 337 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 CX3CR1P49238 355 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 GPX6P59796 221 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 PLP1P60201 277 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 YWHAGP61981 247 aaKnown RBP eCLIP1.46□□□□□ -2.18
CCDC170-203ENST00000544131 ACTG2P63267 376 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 ZNF816Q0VGE8 651 aaPredicted RBP1.46□□□□□ -2.18
CCDC170-203ENST00000544131 BST1Q10588 318 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 BST2Q10589 180 aaKnown RBP1.46□□□□□ -2.18
CCDC170-203ENST00000544131 TWF1Q12792 350 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 ZSCAN26Q16670 478 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 SPIN3Q5JUX0 258 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 CCNJQ5T5M9 372 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 PRAMEF5Q5TYX0 476 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 PRAMEF6Q5VXH4 476 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 KDELC1Q6UW63 502 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 HDDC2Q7Z4H3 204 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 NECAB1Q8N987 351 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 NECAP1Q8NC96 275 aa1.46□□□□□ -2.18
CCDC170-203ENST00000544131 OR13C2Q8NGS9 318 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms