RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 RAC3P60763 192 aa15.07■□□□□ 0
COPS3-212ENST00000539941 ESPNLQ6ZVH7 1005 aa15.07■□□□□ 0
COPS3-212ENST00000539941 CREB3L2Q70SY1 520 aa15.07■□□□□ 0
COPS3-212ENST00000539941 TCTE3Q8IZS6 198 aa15.07■□□□□ 0
COPS3-212ENST00000539941 OR5H6Q8NGV6 325 aa15.07■□□□□ 0
COPS3-212ENST00000539941 ZCCHC14Q8WYQ9 949 aaKnown RBP15.07■□□□□ 0
COPS3-212ENST00000539941 SCMH1Q96GD3 660 aa15.07■□□□□ 0
COPS3-212ENST00000539941 C4orf36Q96KX1 117 aa15.07■□□□□ 0
COPS3-212ENST00000539941 ADAD1Q96M93 576 aaKnown RBP15.07■□□□□ 0
COPS3-212ENST00000539941 INTS14Q96SY0 518 aa15.07■□□□□ 0
COPS3-212ENST00000539941 TTTY12Q9BZ98 90 aa15.07■□□□□ 0
COPS3-212ENST00000539941 MED29Q9NX70 200 aa15.07■□□□□ 0
COPS3-212ENST00000539941 SF3B6Q9Y3B4 125 aaKnown RBP15.07■□□□□ 0
COPS3-212ENST00000539941 TMEM14AQ9Y6G1 99 aa15.07■□□□□ 0
COPS3-212ENST00000539941 CNTRLQ7Z7A1 2325 aa15.07■□□□□ 0
COPS3-212ENST00000539941 CHD6Q8TD26 2715 aa15.07■□□□□ 0
COPS3-212ENST00000539941 NCKAP5O14513 1909 aa15.06■□□□□ 0
COPS3-212ENST00000539941 PHYHO14832 338 aa15.06■□□□□ 0
COPS3-212ENST00000539941 TMCC2O75069 709 aa15.06■□□□□ 0
COPS3-212ENST00000539941 GLSO94925 669 aaPredicted RBP15.06■□□□□ 0
COPS3-212ENST00000539941 CTLA4P16410 223 aa15.06■□□□□ 0
COPS3-212ENST00000539941 GALP22466 123 aa15.06■□□□□ 0
COPS3-212ENST00000539941 SOX6P35712 828 aa15.06■□□□□ 0
COPS3-212ENST00000539941 BIDP55957 195 aa15.06■□□□□ 0
COPS3-212ENST00000539941 GFRA1P56159 465 aa15.06■□□□□ 0
COPS3-212ENST00000539941 ARG2P78540 354 aa15.06■□□□□ 0
COPS3-212ENST00000539941 GLO1Q04760 184 aa15.06■□□□□ 0
COPS3-212ENST00000539941 RUNX1T1Q06455 604 aa15.06■□□□□ 0
COPS3-212ENST00000539941 TBRG1Q3YBR2 411 aa15.06■□□□□ 0
COPS3-212ENST00000539941 WIPI1Q5MNZ9 446 aaPredicted RBP15.06■□□□□ 0
COPS3-212ENST00000539941 SSX6Q7RTT6 188 aa15.06■□□□□ 0
COPS3-212ENST00000539941 KCTD20Q7Z5Y7 419 aa15.06■□□□□ 0
COPS3-212ENST00000539941 CDC20BQ86Y33 519 aa15.06■□□□□ 0
COPS3-212ENST00000539941 TMEM178AQ8NBL3 297 aa15.06■□□□□ 0
COPS3-212ENST00000539941 GALNT11Q8NCW6 608 aa15.06■□□□□ 0
COPS3-212ENST00000539941 OR6X1Q8NH79 312 aa15.06■□□□□ 0
COPS3-212ENST00000539941 HAVCR2Q8TDQ0 301 aa15.06■□□□□ 0
COPS3-212ENST00000539941 SNX33Q8WV41 574 aa15.06■□□□□ 0
COPS3-212ENST00000539941 CENPOQ9BU64 300 aa15.06■□□□□ 0
COPS3-212ENST00000539941 HES7Q9BYE0 225 aa15.06■□□□□ 0
COPS3-212ENST00000539941 WDR76Q9H967 626 aa15.06■□□□□ 0
COPS3-212ENST00000539941 DSPP15924 2871 aaKnown RBP15.06■□□□□ 0
COPS3-212ENST00000539941 FREM3P0C091 2139 aa15.06■□□□□ 0
COPS3-212ENST00000539941 ZNF814B7Z6K7 855 aa15.06■□□□□ 0
COPS3-212ENST00000539941 J3QLW9 94 aa15.06■□□□□ 0
COPS3-212ENST00000539941 IGHG1P01857 330 aa15.06■□□□□ 0
COPS3-212ENST00000539941 NR2C1P13056 603 aa15.06■□□□□ 0
COPS3-212ENST00000539941 ZNF19P17023 458 aa15.06■□□□□ 0
COPS3-212ENST00000539941 CELP19835 753 aa15.06■□□□□ 0
COPS3-212ENST00000539941 OR12D2P58182 307 aa15.06■□□□□ 0
COPS3-212ENST00000539941 CD200R1LQ6Q8B3 271 aa15.06■□□□□ 0
COPS3-212ENST00000539941 LYPD4Q6UWN0 246 aa15.06■□□□□ 0
COPS3-212ENST00000539941 IGFL2Q6UWQ7 119 aa15.06■□□□□ 0
COPS3-212ENST00000539941 GALNTL5Q7Z4T8 443 aa15.06■□□□□ 0
COPS3-212ENST00000539941 GPAT4Q86UL3 456 aa15.06■□□□□ 0
COPS3-212ENST00000539941 GGNQ86UU5 652 aa15.06■□□□□ 0
COPS3-212ENST00000539941 CELF2-AS1Q8N7Q2 184 aa15.06■□□□□ 0
COPS3-212ENST00000539941 SMAP2Q8WU79 429 aaPredicted RBP15.06■□□□□ 0
COPS3-212ENST00000539941 SLC25A44Q96H78 314 aaPredicted RBP15.06■□□□□ 0
COPS3-212ENST00000539941 MAP6Q96JE9 813 aa15.06■□□□□ 0
COPS3-212ENST00000539941 RBP7Q96R05 134 aa15.06■□□□□ 0
COPS3-212ENST00000539941 MRPL13Q9BYD1 178 aaKnown RBP15.06■□□□□ 0
COPS3-212ENST00000539941 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.06■□□□□ 0
COPS3-212ENST00000539941 RERGLQ9H628 205 aa15.06■□□□□ 0
COPS3-212ENST00000539941 EXOSC4Q9NPD3 245 aaKnown RBP15.06■□□□□ 0
COPS3-212ENST00000539941 COPS3Q9UNS2 423 aa15.06■□□□□ 0
COPS3-212ENST00000539941 TRDV1A0A1B0GX56 115 aa15.05■□□□□ -0
COPS3-212ENST00000539941 TNFSF11O14788 317 aa15.05■□□□□ -0
COPS3-212ENST00000539941 KHDRBS3O75525 346 aaKnown RBP15.05■□□□□ -0
COPS3-212ENST00000539941 HLA-DPB1P04440 258 aa15.05■□□□□ -0
COPS3-212ENST00000539941 POU3F2P20265 443 aaPredicted RBP15.05■□□□□ -0
COPS3-212ENST00000539941 MEOX1P50221 254 aa15.05■□□□□ -0
COPS3-212ENST00000539941 CCL11P51671 97 aa15.05■□□□□ -0
COPS3-212ENST00000539941 GBX2P52951 348 aaPredicted RBP15.05■□□□□ -0
COPS3-212ENST00000539941 HCCSP53701 268 aa15.05■□□□□ -0
COPS3-212ENST00000539941 PLGLB1Q02325 96 aa15.05■□□□□ -0
COPS3-212ENST00000539941 MRPL28Q13084 256 aaKnown RBP15.05■□□□□ -0
COPS3-212ENST00000539941 TRAM1Q15629 374 aa15.05■□□□□ -0
COPS3-212ENST00000539941 THEM4Q5T1C6 240 aa15.05■□□□□ -0
COPS3-212ENST00000539941 PDSS1Q5T2R2 415 aa15.05■□□□□ -0
COPS3-212ENST00000539941 ZFP62Q8NB50 900 aaPredicted RBP15.05■□□□□ -0
COPS3-212ENST00000539941 NOXO1Q8NFA2 376 aa15.05■□□□□ -0
COPS3-212ENST00000539941 OR2V1Q8NHB1 315 aa15.05■□□□□ -0
COPS3-212ENST00000539941 ADGRG7Q96K78 797 aa15.05■□□□□ -0
COPS3-212ENST00000539941 SF3B5Q9BWJ5 86 aaKnown RBP15.05■□□□□ -0
COPS3-212ENST00000539941 C6orf62Q9GZU0 229 aaPredicted RBP15.05■□□□□ -0
COPS3-212ENST00000539941 LIN7BQ9HAP6 207 aa15.05■□□□□ -0
COPS3-212ENST00000539941 ALPK2Q86TB3 2170 aa15.05■□□□□ -0
COPS3-212ENST00000539941 CELSR3Q9NYQ7 3312 aa15.04■□□□□ -0
COPS3-212ENST00000539941 TVP23AA6NH52 213 aa15.04■□□□□ -0
COPS3-212ENST00000539941 PLPP2O43688 288 aa15.04■□□□□ -0
COPS3-212ENST00000539941 TLX3O43711 291 aaPredicted RBP15.04■□□□□ -0
COPS3-212ENST00000539941 ZNF780AO75290 641 aaPredicted RBP15.04■□□□□ -0
COPS3-212ENST00000539941 PGA4P0DJD7 388 aa15.04■□□□□ -0
COPS3-212ENST00000539941 PGA3P0DJD8 388 aa15.04■□□□□ -0
COPS3-212ENST00000539941 GAAP10253 952 aa15.04■□□□□ -0
COPS3-212ENST00000539941 FGF9P31371 208 aaPredicted RBP15.04■□□□□ -0
COPS3-212ENST00000539941 TNFSF10P50591 281 aa15.04■□□□□ -0
COPS3-212ENST00000539941 CARD18P57730 90 aa15.04■□□□□ -0
COPS3-212ENST00000539941 RPS25P62851 125 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms