RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 P4HTMQ9NXG6 502 aa9.1□□□□□ -0.95
SPARC-209ENST00000539687 B4GALT7Q9UBV7 327 aa9.1□□□□□ -0.95
SPARC-209ENST00000539687 FOXJ3Q9UPW0 622 aa9.1□□□□□ -0.95
SPARC-209ENST00000539687 CAMK2AQ9UQM7 478 aa9.1□□□□□ -0.95
SPARC-209ENST00000539687 KLHDC2Q9Y2U9 406 aa9.1□□□□□ -0.95
SPARC-209ENST00000539687 TRBV5-7A0A0A0MS05 114 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 TEX51A0A1B0GUA7 166 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 SMIM30A4D0T7 59 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 ANXA2P2A6NMY6 339 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 C9orf172C9J069 976 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 STMND1H3BQB6 276 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 CTDSPLO15194 276 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 SULT1B1O43704 296 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 TRAF3IP2O43734 574 aaPredicted RBP9.09□□□□□ -0.95
SPARC-209ENST00000539687 GDF9O60383 454 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 RAD1O60671 282 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 ANXA2P07355 339 aaKnown RBP9.09□□□□□ -0.95
SPARC-209ENST00000539687 H2BFMP0C1H6 154 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 PGA4P0DJD7 388 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 PGA3P0DJD8 388 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 ELK1P19419 428 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 ACHEP22303 614 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 DLSTP36957 453 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 MAP2K3P46734 347 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 CSRP2Q16527 193 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 KCNMB1Q16558 191 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 BAK1Q16611 211 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 CCDC157Q569K6 752 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 ACER2Q5QJU3 275 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 FAM27D1Q5T7N8 215 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 LYPD4Q6UWN0 246 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 CDH24Q86UP0 819 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 OR2AJ1Q8NGZ0 328 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 SNRNP27Q8WVK2 155 aaKnown RBP9.09□□□□□ -0.95
SPARC-209ENST00000539687 TSEN15Q8WW01 171 aaKnown RBP9.09□□□□□ -0.95
SPARC-209ENST00000539687 PPIL3Q9H2H8 161 aaKnown RBP9.09□□□□□ -0.95
SPARC-209ENST00000539687 SLCO1C1Q9NYB5 712 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 B3GAT1Q9P2W7 334 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 TBC1D24Q9ULP9 559 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 HHLA2Q9UM44 414 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 DHDHQ9UQ10 334 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 R4GN57 208 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 VPS13AQ96RL7 3174 aa9.09□□□□□ -0.95
SPARC-209ENST00000539687 COL27A1Q8IZC6 1860 aaPredicted RBP9.08□□□□□ -0.96
SPARC-209ENST00000539687 CPAMD8Q8IZJ3 1885 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 OR2M5A3KFT3 312 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 C4orf47A7E2U8 309 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 PRR32B1ATL7 298 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 B4DXG7 233 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 NPIPA2E9PIF3 369 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 NPIPA3F8WFD2 350 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 MAGEB4O15481 346 aaPredicted RBP9.08□□□□□ -0.96
SPARC-209ENST00000539687 EFNA2O43921 213 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 APOC1P02654 83 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 CELA2AP08217 269 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 HLA-DOBP13765 273 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 ATF1P18846 271 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 FSTP19883 344 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 IL11P20809 199 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 CNR1P21554 472 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 SFTPDP35247 375 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 MNDAP41218 407 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 CD97P48960 835 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 MMP16P51512 607 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 P2RY4P51582 365 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 AGFG1P52594 562 aaKnown RBP9.08□□□□□ -0.96
SPARC-209ENST00000539687 OR10A3P58181 314 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 AP3S2P59780 193 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 H3F3AP84243 136 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 AIMP2Q13155 320 aaKnown RBP9.08□□□□□ -0.96
SPARC-209ENST00000539687 TOMM20Q15388 145 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 WDR38Q5JTN6 314 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 CEP78Q5JTW2 689 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 HES3Q5TGS1 186 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 ABHD17BQ5VST6 288 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 PLET1Q6UQ28 207 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 STAC2Q6ZMT1 411 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 ESPNLQ6ZVH7 1005 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 TIPARPQ7Z3E1 657 aaKnown RBP9.08□□□□□ -0.96
SPARC-209ENST00000539687 GPAT4Q86UL3 456 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 NR2C2APQ86WQ0 139 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 CATSPERDQ86XM0 798 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 NKAIN3Q8N8D7 197 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 CCDC54Q8NEL0 328 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 OR4M1Q8NGD0 313 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 OR13C5Q8NGS8 318 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 RNF133Q8WVZ7 376 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 DEDD2Q8WXF8 326 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 MCHR2Q969V1 340 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 TMEM106AQ96A25 262 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 FOXRED1Q96CU9 486 aaPredicted RBP9.08□□□□□ -0.96
SPARC-209ENST00000539687 JSRP1Q96MG2 331 aaPredicted RBP9.08□□□□□ -0.96
SPARC-209ENST00000539687 WACQ9BTA9 647 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 OR2B2Q9GZK3 357 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 HDHD2Q9H0R4 259 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 RBFOX1Q9NWB1 397 aaKnown RBP9.08□□□□□ -0.96
SPARC-209ENST00000539687 MED29Q9NX70 200 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 COPZ2Q9P299 210 aa9.08□□□□□ -0.96
SPARC-209ENST00000539687 CDV3Q9UKY7 258 aaKnown RBP9.08□□□□□ -0.96
SPARC-209ENST00000539687 POLR1DQ9Y2S0 133 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms