RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 HIVEP1P15822 2718 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 CELSR1Q9NYQ6 3014 aa17.19■□□□□ 0.34
CPSF1-209ENST00000532725 KHDRBS3O75525 346 aaKnown RBP17.19■□□□□ 0.34
CPSF1-209ENST00000532725 TIPRLO75663 272 aa17.19■□□□□ 0.34
CPSF1-209ENST00000532725 CST2P09228 141 aa17.19■□□□□ 0.34
CPSF1-209ENST00000532725 NKX6-1P78426 367 aaPredicted RBP17.19■□□□□ 0.34
CPSF1-209ENST00000532725 MST1LQ2TV78 715 aa17.19■□□□□ 0.34
CPSF1-209ENST00000532725 ZNF362Q5T0B9 420 aaPredicted RBP17.19■□□□□ 0.34
CPSF1-209ENST00000532725 C11orf71Q6IPW1 123 aa17.19■□□□□ 0.34
CPSF1-209ENST00000532725 KRTAP1-3Q8IUG1 177 aa17.19■□□□□ 0.34
CPSF1-209ENST00000532725 HS3ST5Q8IZT8 346 aa17.19■□□□□ 0.34
CPSF1-209ENST00000532725 FBXL14Q8N1E6 418 aa17.19■□□□□ 0.34
CPSF1-209ENST00000532725 NMNAT3Q96T66 252 aa17.19■□□□□ 0.34
CPSF1-209ENST00000532725 CA10Q9NS85 328 aa17.19■□□□□ 0.34
CPSF1-209ENST00000532725 CBLN4Q9NTU7 201 aa17.19■□□□□ 0.34
CPSF1-209ENST00000532725 ARMC1Q9NVT9 282 aa17.19■□□□□ 0.34
CPSF1-209ENST00000532725 REV1Q9UBZ9 1251 aa17.19■□□□□ 0.34
CPSF1-209ENST00000532725 COA3Q9Y2R0 106 aaPredicted RBP17.19■□□□□ 0.34
CPSF1-209ENST00000532725 A0A1W2PPL8 197 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 DCTN6O00399 190 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 ZNF32P17041 273 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 MSR1P21757 451 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 PRKACGP22612 351 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 NR4A1P22736 598 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 NOS3P29474 1203 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 PTH2RP49190 550 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 ADAM8P78325 824 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 ENDOGQ14249 297 aaKnown RBP17.18■□□□□ 0.34
CPSF1-209ENST00000532725 SLC35F1Q5T1Q4 408 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 LEG1Q6P5S2 330 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 UGT2A3Q6UWM9 527 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 OR6V1Q8N148 313 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 LNX2Q8N448 690 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 NPEPL1Q8NDH3 523 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 CPEB3Q8NE35 698 aaKnown RBP17.18■□□□□ 0.34
CPSF1-209ENST00000532725 OR52L1Q8NGH7 329 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 TSSK2Q96PF2 358 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 TSSK6Q9BXA6 273 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 SRA1Q9HD15 236 aaKnown RBP17.18■□□□□ 0.34
CPSF1-209ENST00000532725 B9D1Q9UPM9 204 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 AP4S1Q9Y587 144 aa17.18■□□□□ 0.34
CPSF1-209ENST00000532725 OR6C68A6NDL8 312 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 E2F6O75461 281 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 CIB2O75838 187 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 CRABP1P29762 137 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 THBS4P35443 961 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 PSG4Q00888 419 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 SWI5Q1ZZU3 235 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 PABPC1L2AQ5JQF8 200 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 SYT9Q86SS6 491 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 JAZF1Q86VZ6 243 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 GLB1L2Q8IW92 636 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 SLC30A7Q8NEW0 376 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 OR52E2Q8NGJ4 325 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 NRBF2Q96F24 287 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 PERPQ96FX8 193 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 FOXN4Q96NZ1 517 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 WACQ9BTA9 647 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 ZNF416Q9BWM5 594 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 RERGLQ9H628 205 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 EMC7Q9NPA0 242 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 CCNB1IP1Q9NPC3 277 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.17■□□□□ 0.34
CPSF1-209ENST00000532725 TIMM10BQ9Y5J6 103 aa17.17■□□□□ 0.34
CPSF1-209ENST00000532725 IGLV1-36A0A0B4J1U3 117 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 DEAF1O75398 565 aaPredicted RBP17.16■□□□□ 0.34
CPSF1-209ENST00000532725 MPZL1O95297 269 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 SOX14O95416 240 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 RENP00797 406 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 PTHP01270 115 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 SERPINF1P36955 418 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 CDKN1AP38936 164 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 PLP2Q04941 152 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.16■□□□□ 0.34
CPSF1-209ENST00000532725 DAG1Q14118 895 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 ADIPOQQ15848 244 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 KCNMB1Q16558 191 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 SHEQ5VZ18 495 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 SHQ1Q6PI26 577 aaKnown RBP17.16■□□□□ 0.34
CPSF1-209ENST00000532725 PRSS57Q6UWY2 283 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 ZBTB46Q86UZ6 589 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 OR4Q3Q8NH05 313 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 OR2H1Q9GZK4 316 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 C1orf198Q9H425 327 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 ZNF442Q9H7R0 627 aa17.16■□□□□ 0.34
CPSF1-209ENST00000532725 F8P00451 2351 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 IQCMA0A1B0GVH7 501 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 C12orf71A8MTZ7 269 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 OR4A8P0C604 315 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 CCL2P13500 99 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 ANXA8P13928 327 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 APEX1P27695 318 aaKnown RBP17.15■□□□□ 0.34
CPSF1-209ENST00000532725 ARHGDIAP52565 204 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 PCBD1P61457 104 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 LSM6P62312 80 aaKnown RBP17.15■□□□□ 0.34
CPSF1-209ENST00000532725 HSF2Q03933 536 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 DBPQ10586 325 aaPredicted RBP17.15■□□□□ 0.34
CPSF1-209ENST00000532725 ATP6AP1Q15904 470 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 KRT80Q6KB66 452 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 VHLLQ6RSH7 139 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms