RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 PNLIPRP2P54317 469 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 RAP1BP61224 184 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 RAP1AP62834 184 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 ADAM8P78325 824 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 EIF2B1Q14232 305 aaKnown RBP8.03□□□□□ -1.12
PKP3-202ENST00000524646 GK2Q14410 553 aaPredicted RBP8.03□□□□□ -1.12
PKP3-202ENST00000524646 TOMM34Q15785 309 aaPredicted RBP8.03□□□□□ -1.12
PKP3-202ENST00000524646 ODF4Q2M2E3 257 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 C14orf28Q4W4Y0 310 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 YOD1Q5VVQ6 348 aaPredicted RBP8.03□□□□□ -1.12
PKP3-202ENST00000524646 TMEM225Q6GV28 225 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 OR7E24Q6IFN5 339 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 STEAP1BQ6NZ63 245 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 POMZP3Q6PJE2 187 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 DNM1P34Q6PK57 102 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 TTLL10Q6ZVT0 673 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 SLC35D2Q76EJ3 337 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 SLC29A4Q7RTT9 530 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 OVCH2Q7RTZ1 564 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 BIVMQ86UB2 503 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 MARCH3Q86UD3 253 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 BPHLQ86WA6 291 aaPredicted RBP8.03□□□□□ -1.12
PKP3-202ENST00000524646 NAXDQ8IW45 347 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 GABRG1Q8N1C3 465 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 FAM160A2Q8N612 972 aaPredicted RBP8.03□□□□□ -1.12
PKP3-202ENST00000524646 TMEM229BQ8NBD8 167 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 CLEC1AQ8NC01 280 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 SMRP1Q8NCR6 262 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 OR5M1Q8NGP8 315 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 OR6S1Q8NH40 331 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 SCARB1Q8WTV0 552 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 TNFAIP8L1Q8WVP5 186 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.03□□□□□ -1.12
PKP3-202ENST00000524646 PCNPQ8WW12 178 aaKnown RBP8.03□□□□□ -1.12
PKP3-202ENST00000524646 EDAQ92838 391 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 SLC25A28Q96A46 364 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 SEMA4CQ9C0C4 833 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 ATG5Q9H1Y0 275 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 CHRDQ9H2X0 955 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 C1orf198Q9H425 327 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 EXO5Q9H790 373 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 MYOZ1Q9NP98 299 aaPredicted RBP8.03□□□□□ -1.12
PKP3-202ENST00000524646 PRMT8Q9NR22 394 aaPredicted RBP8.03□□□□□ -1.12
PKP3-202ENST00000524646 SLC2A4RGQ9NR83 387 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 TAS2R4Q9NYW5 299 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 ZNF224Q9NZL3 707 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 COPS7AQ9UBW8 275 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 ZNF107Q9UII5 783 aaPredicted RBP8.03□□□□□ -1.12
PKP3-202ENST00000524646 GTF2A1LQ9UNN4 478 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 SLC22A13Q9Y226 551 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 LRP12Q9Y561 859 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 SESN1Q9Y6P5 492 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 R4GMQ9 66 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 CACNA1CQ13936 2221 aa8.03□□□□□ -1.12
PKP3-202ENST00000524646 BRWD1Q9NSI6 2320 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 TRANK1O15050 2925 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 FXYD6-FXYD2A0A087WZ82 144 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.02□□□□□ -1.13
PKP3-202ENST00000524646 LOC105371267A0A1B0GV96 52 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 LOC107986453A0A1B0GWG9 222 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.02□□□□□ -1.13
PKP3-202ENST00000524646 A0A1W2PPC1 479 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 MFSD2BA6NFX1 497 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 NPIPB13A6NJU9 1138 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 C17orf51A8MQB3 221 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 C2CD4DB7Z1M9 353 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 NPIPB4C9JG80 1138 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 H3BSH0 61 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 H3BUI4 141 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 PLPP3O14495 311 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 LDLRAD4O15165 306 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 ARPC5O15511 151 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 GMFGO60234 142 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 SLC16A7O60669 478 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 PNPP00491 289 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 ITGB2P05107 769 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 NMBP08949 121 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 FBXO45P0C2W1 286 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 CD37P11049 281 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 ZNF250P15622 560 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 NFYAP23511 347 aaPredicted RBP8.02□□□□□ -1.13
PKP3-202ENST00000524646 CD27P26842 260 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 HTR2CP28335 458 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 CRABP1P29762 137 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 LTBRP36941 435 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 NR0B1P51843 470 aaKnown RBP8.02□□□□□ -1.13
PKP3-202ENST00000524646 EFNA3P52797 238 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 CAPZA1P52907 286 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 ZP2Q05996 745 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 MELKQ14680 651 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 KCNAB1Q14722 419 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 HLXQ14774 488 aaPredicted RBP8.02□□□□□ -1.13
PKP3-202ENST00000524646 MFSD13AQ14CX5 517 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 ARHGAP40Q5TG30 622 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 C1QL3Q5VWW1 255 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 TSSK4Q6SA08 328 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 TMUB2Q71RG4 321 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 SYT13Q7L8C5 426 aa8.02□□□□□ -1.13
PKP3-202ENST00000524646 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.02□□□□□ -1.13
PKP3-202ENST00000524646 GPAT4Q86UL3 456 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms