RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 LEG1Q6P5S2 330 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 B3GLCTQ6Y288 498 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 SPNS3Q6ZMD2 512 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 PTCHD4Q6ZW05 846 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 GLB1L2Q8IW92 636 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 MUC15Q8N387 334 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 LNX2Q8N448 690 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 LRRC18Q8N456 261 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 OR2T33Q8NG76 320 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 OR1J2Q8NGS2 313 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 TEX47Q8TBZ9 253 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 NIPSNAP1Q9BPW8 284 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 BDH2Q9BUT1 245 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 TRAF4Q9BUZ4 470 aaPredicted RBP10.89□□□□□ -0.67
VEGFA-225ENST00000523950 RACGAP1Q9H0H5 632 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 SEC61A2Q9H9S3 476 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 POLE4Q9NR33 117 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 CA10Q9NS85 328 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 CBLN4Q9NTU7 201 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 ZNF701Q9NV72 531 aaPredicted RBP10.89□□□□□ -0.67
VEGFA-225ENST00000523950 LAMP3Q9UQV4 416 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 AP4S1Q9Y587 144 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 FKBP7Q9Y680 259 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 CSMD2Q7Z408 3487 aa10.89□□□□□ -0.67
VEGFA-225ENST00000523950 OVOL3O00110 214 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 SLC16A7O60669 478 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 TIPRLO75663 272 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 SNAP29O95721 258 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 SOD3P08294 240 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 BMP4P12644 408 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 ZNF35P13682 527 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 CALCRP30988 508 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 ERFP50548 548 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 ACTR3P61158 418 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 LSM6P62312 80 aaKnown RBP10.88□□□□□ -0.67
VEGFA-225ENST00000523950 HSF2Q03933 536 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 SCRN3Q0VDG4 424 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 RAB39AQ14964 217 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 TBC1D28Q2M2D7 210 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 CLEC12AQ5QGZ9 265 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 SHEQ5VZ18 495 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 PRSS57Q6UWY2 283 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 TMEM179BQ7Z7N9 219 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 ZBTB46Q86UZ6 589 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 MYPOPQ86VE0 399 aaPredicted RBP10.88□□□□□ -0.67
VEGFA-225ENST00000523950 ZNF584Q8IVC4 421 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 ALDH16A1Q8IZ83 802 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 OR8D4Q8NGM9 314 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 OR4K13Q8NH42 304 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 OR5K1Q8NHB7 308 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 FGFBP3Q8TAT2 258 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 STMN2Q93045 179 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 TRMT61AQ96FX7 289 aaKnown RBP10.88□□□□□ -0.67
VEGFA-225ENST00000523950 TSSK6Q9BXA6 273 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 PLA2G12AQ9BZM1 189 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 NUAK2Q9H093 628 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 NTN4Q9HB63 628 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 KLHL21Q9UJP4 597 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 TIMM10BQ9Y5J6 103 aa10.88□□□□□ -0.67
VEGFA-225ENST00000523950 SPG11Q96JI7 2443 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 H3BN98 237 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 IFNGP01579 166 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 TP53P04637 393 aaPredicted RBP10.87□□□□□ -0.67
VEGFA-225ENST00000523950 PATE4P0C8F1 98 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 COX5BP10606 129 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 OSMP13725 252 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 ZNF32P17041 273 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 NR4A1P22736 598 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 APLNRP35414 380 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 PTH2RP49190 550 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 RPS23P62266 143 aaKnown RBP10.87□□□□□ -0.67
VEGFA-225ENST00000523950 NKX6-1P78426 367 aaPredicted RBP10.87□□□□□ -0.67
VEGFA-225ENST00000523950 GALK2Q01415 458 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 HGFACQ04756 655 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 GLO1Q04760 184 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.87□□□□□ -0.67
VEGFA-225ENST00000523950 AQP6Q13520 282 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 DAG1Q14118 895 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 ENDOGQ14249 297 aaKnown RBP10.87□□□□□ -0.67
VEGFA-225ENST00000523950 EFNB3Q15768 340 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 ETFDHQ16134 617 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 KCNMB1Q16558 191 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 C11orf71Q6IPW1 123 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 ZFP1Q6P2D0 407 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 UNQ6126/PRO20091Q6UXV3 157 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 HIPK1Q86Z02 1210 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 ATG16L2Q8NAA4 619 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 NPEPL1Q8NDH3 523 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 SLC30A7Q8NEW0 376 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 SDR9C7Q8NEX9 313 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 OR52E2Q8NGJ4 325 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 HTRA1Q92743 480 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 FBXO17Q96EF6 278 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 MS4A3Q96HJ5 214 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 NMNAT3Q96T66 252 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 CDH20Q9HBT6 801 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 REV1Q9UBZ9 1251 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 B9D1Q9UPM9 204 aa10.87□□□□□ -0.67
VEGFA-225ENST00000523950 COA3Q9Y2R0 106 aaPredicted RBP10.87□□□□□ -0.67
VEGFA-225ENST00000523950 AKAP6Q13023 2319 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms