RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 EIF3GO75821 320 aaKnown RBP eCLIP1.87□□□□□ -2.11
SKP1-207ENST00000520417 GABARAPO95166 117 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 FGGP02679 453 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 CHMLP26374 656 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 CALRP27797 417 aaKnown RBP1.87□□□□□ -2.11
SKP1-207ENST00000520417 SERPINB5P36952 375 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 NUTF2P61970 127 aaKnown RBP1.87□□□□□ -2.11
SKP1-207ENST00000520417 YWHAGP61981 247 aaKnown RBP eCLIP1.87□□□□□ -2.11
SKP1-207ENST00000520417 ESRRGP62508 458 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 ERCC8Q13216 396 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 DDX39BQ13838 428 aaKnown RBP1.87□□□□□ -2.11
SKP1-207ENST00000520417 CLINT1Q14677 625 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 ZSCAN26Q16670 478 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 SPIN3Q5JUX0 258 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 PRAMEF5Q5TYX0 476 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 PRAMEF6Q5VXH4 476 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 ABHD13Q7L211 337 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 NANOGNBQ7Z5D8 188 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 TMEM135Q86UB9 458 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 OR10G4Q8NGN3 311 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 OR13C2Q8NGS9 318 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 RHEBL1Q8TAI7 183 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 TMEM54Q969K7 222 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 FBXO32Q969P5 355 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 FAM3DQ96BQ1 224 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 P2RX4Q99571 388 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 GPATCH2LQ9NWQ4 482 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 CTNNA3Q9UI47 895 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 NUP50Q9UKX7 468 aa1.87□□□□□ -2.11
SKP1-207ENST00000520417 CENPJQ9HC77 1338 aaPredicted RBP1.87□□□□□ -2.11
SKP1-207ENST00000520417 IGLV1-50A0A075B6I6 118 aa1.86□□□□□ -2.11
SKP1-207ENST00000520417 A0A1W2PPV9 198 aa1.86□□□□□ -2.11
SKP1-207ENST00000520417 KITLGP21583 273 aa1.86□□□□□ -2.11
SKP1-207ENST00000520417 HNRNPH3P31942 346 aaKnown RBP1.86□□□□□ -2.11
SKP1-207ENST00000520417 CRYBB2P43320 205 aa1.86□□□□□ -2.11
SKP1-207ENST00000520417 ACTG2P63267 376 aa1.86□□□□□ -2.11
SKP1-207ENST00000520417 MRPS22P82650 360 aaKnown RBP1.86□□□□□ -2.11
SKP1-207ENST00000520417 HMGN5P82970 282 aaKnown RBP1.86□□□□□ -2.11
SKP1-207ENST00000520417 BST1Q10588 318 aa1.86□□□□□ -2.11
SKP1-207ENST00000520417 BST2Q10589 180 aaKnown RBP1.86□□□□□ -2.11
SKP1-207ENST00000520417 SSX2Q16385 188 aa1.86□□□□□ -2.11
SKP1-207ENST00000520417 CEP55Q53EZ4 464 aa1.86□□□□□ -2.11
SKP1-207ENST00000520417 SLC25A48Q6ZT89 311 aaKnown RBP1.86□□□□□ -2.11
SKP1-207ENST00000520417 SPATA4Q8NEY3 305 aa1.86□□□□□ -2.11
SKP1-207ENST00000520417 OR9K2Q8NGE7 335 aa1.86□□□□□ -2.11
SKP1-207ENST00000520417 RNF139Q8WU17 664 aa1.86□□□□□ -2.11
SKP1-207ENST00000520417 PIBF1Q8WXW3 757 aa1.86□□□□□ -2.11
SKP1-207ENST00000520417 PIK3IP1Q96FE7 263 aa1.86□□□□□ -2.11
SKP1-207ENST00000520417 ZNF382Q96SR6 550 aa1.86□□□□□ -2.11
SKP1-207ENST00000520417 MRPL37Q9BZE1 423 aaKnown RBP1.86□□□□□ -2.11
SKP1-207ENST00000520417 LINC00597Q9H2U6 94 aa1.86□□□□□ -2.11
SKP1-207ENST00000520417 C12orf10Q9HB07 376 aa1.86□□□□□ -2.11
SKP1-207ENST00000520417 SAMSN1Q9NSI8 373 aaKnown RBP1.86□□□□□ -2.11
SKP1-207ENST00000520417 SLC2A8Q9NY64 477 aa1.86□□□□□ -2.11
SKP1-207ENST00000520417 PSMC3IPQ9P2W1 217 aaPredicted RBP1.86□□□□□ -2.11
SKP1-207ENST00000520417 GPATCH8Q9UKJ3 1502 aaKnown RBP1.86□□□□□ -2.11
SKP1-207ENST00000520417 TRAV39A0A0B4J263 110 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 IGHV5-10-1A0A0J9YXX1 117 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 A0A1W2PPE3 182 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 ZNF850A8MQ14 1090 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 CCNKO75909 580 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 RAB3DO95716 219 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 AIFM1O95831 613 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 SLC2A3P11169 496 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 FOLR1P15328 257 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 CDKN2BP42772 138 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 NAMPTP43490 491 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 ATP5IP56385 69 aaPredicted RBP1.85□□□□□ -2.11
SKP1-207ENST00000520417 GPX6P59796 221 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 PLP1P60201 277 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 ACTR3P61158 418 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 IRX3P78415 501 aaPredicted RBP1.85□□□□□ -2.11
SKP1-207ENST00000520417 TWF1Q12792 350 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 PIGHQ14442 188 aaPredicted RBP1.85□□□□□ -2.11
SKP1-207ENST00000520417 PON3Q15166 354 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 PPP1R7Q15435 360 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 VPS26BQ4G0F5 336 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 CCNJQ5T5M9 372 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 ANKRD26P1Q6NSI1 321 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 RNASEKQ6P5S7 137 aaKnown RBP1.85□□□□□ -2.11
SKP1-207ENST00000520417 ASCL5Q7RTU5 278 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 WDR86Q86TI4 376 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 PDIK1LQ8N165 341 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 LIX1Q8N485 282 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 HSD17B11Q8NBQ5 300 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 OR4S2Q8NH73 311 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 PLPPR1Q8TBJ4 325 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 SHC3Q92529 594 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 NT5C3BQ969T7 300 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 TM4SF18Q96CE8 201 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 TUBGCP3Q96CW5 907 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 LRRC58Q96CX6 371 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 DOK1Q99704 481 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 SULT4A1Q9BR01 284 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 TCHPQ9BT92 498 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 SLC25A2Q9BXI2 301 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 METTL7AQ9H8H3 244 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 HMG20AQ9NP66 347 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 KCNJ16Q9NPI9 418 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 ETNK2Q9NVF9 386 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms