RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 ZNF823P16415 610 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 GABRB1P18505 474 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 SLC2A5P22732 501 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 GSTT1P30711 240 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 HTR1FP30939 366 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 ISL1P61371 349 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 HSF2Q03933 536 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 SGCAQ16586 387 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 SFRP5Q5T4F7 317 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 FOXL2NBQ6ZUU3 175 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 P2RY8Q86VZ1 359 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 BBS1Q8NFJ9 593 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 SLC26A10Q8NG04 563 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 PTP4A1Q93096 173 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 SIAEQ9HAT2 523 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 MOV10Q9HCE1 1003 aaKnown RBP12.42□□□□□ -0.42
SDC2-203ENST00000519587 OBP2BQ9NPH6 170 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 POLE4Q9NR33 117 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 RELNP78509 3460 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 IRGMA1A4Y4 181 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 C12orf71A8MTZ7 269 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 DENRO43583 198 aaKnown RBP12.41□□□□□ -0.42
SDC2-203ENST00000519587 ENTPD6O75354 484 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 SEC14L2O76054 403 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 GAAP10253 952 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 HOXB1P14653 301 aaPredicted RBP12.41□□□□□ -0.42
SDC2-203ENST00000519587 PPP3CBP16298 524 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 PAX7P23759 505 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 CDAP32320 146 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 PEX19P40855 299 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 UBE2NP61088 152 aaKnown RBP12.41□□□□□ -0.42
SDC2-203ENST00000519587 PCBD1P61457 104 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 LSM6P62312 80 aaKnown RBP12.41□□□□□ -0.42
SDC2-203ENST00000519587 CSNK2BP67870 215 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 SORDQ00796 357 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 MED21Q13503 144 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 GGTLC2Q14390 218 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 ETFDHQ16134 617 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 KCNMB1Q16558 191 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 SLC36A2Q495M3 483 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 STAC2Q6ZMT1 411 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 SLC22A24Q8N4F4 322 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 OR51L1Q8NGJ5 315 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 CNIH3Q8TBE1 160 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 SSC4DQ8WTU2 575 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 UBE2FQ969M7 185 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 ZNF837Q96EG3 531 aaPredicted RBP12.41□□□□□ -0.42
SDC2-203ENST00000519587 INTS14Q96SY0 518 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 CNN2Q99439 309 aaKnown RBP12.41□□□□□ -0.42
SDC2-203ENST00000519587 WACQ9BTA9 647 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 AMDHD2Q9Y303 409 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 RPL36Q9Y3U8 105 aaKnown RBP12.41□□□□□ -0.42
SDC2-203ENST00000519587 COMMD3-BMI1R4GMX3 469 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 CREBBPQ92793 2442 aa12.41□□□□□ -0.42
SDC2-203ENST00000519587 NKX2-6A6NCS4 301 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 CCDC182A6NF36 153 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 FAM171A2A8MVW0 826 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 TMCC2O75069 709 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 WNT11O96014 354 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 UGT2B10P36537 528 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 ATP6V1E1P36543 226 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 MTNR1AP48039 350 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 ENTPD1P49961 510 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 ADAM8P78325 824 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 AQP6Q13520 282 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 GABRA6Q16445 453 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 TBRG1Q3YBR2 411 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 LINC01590Q5TEZ4 76 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 FAM27BQ5VT28 67 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 HIST2H2BCQ6DN03 193 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 SLC16A14Q7RTX9 510 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 BCDIN3DQ7Z5W3 292 aaKnown RBP12.4□□□□□ -0.42
SDC2-203ENST00000519587 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.4□□□□□ -0.42
SDC2-203ENST00000519587 ERI1Q8IV48 349 aaKnown RBP12.4□□□□□ -0.42
SDC2-203ENST00000519587 FBLIM1Q8WUP2 373 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 APH1BQ8WW43 257 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 BCL2L2Q92843 193 aaPredicted RBP12.4□□□□□ -0.42
SDC2-203ENST00000519587 ZMYND19Q96E35 227 aaPredicted RBP12.4□□□□□ -0.42
SDC2-203ENST00000519587 BOD1Q96IK1 185 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 TEAD3Q99594 435 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 ACTR6Q9GZN1 396 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 CCNB1IP1Q9NPC3 277 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 HAO2Q9NYQ3 351 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 BLOC1S6Q9UL45 172 aa12.4□□□□□ -0.42
SDC2-203ENST00000519587 ANKHD1Q8IWZ3 2542 aaKnown RBP12.4□□□□□ -0.42
SDC2-203ENST00000519587 A0A096LPE4 126 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 A0A1W2PPZ6 126 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 OR5H1A6NKK0 313 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 WBP4O75554 376 aaKnown RBP12.39□□□□□ -0.43
SDC2-203ENST00000519587 UBL3O95164 117 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 CST2P09228 141 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 CAPZA2P47755 286 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 NUDT6P53370 316 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 FOXG1P55316 489 aaPredicted RBP12.39□□□□□ -0.43
SDC2-203ENST00000519587 ZNF91Q05481 1191 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 SCRN3Q0VDG4 424 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 CDK5R2Q13319 367 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 TIMM23BQ5SRD1 257 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 TMEM53Q6P2H8 277 aa12.39□□□□□ -0.43
SDC2-203ENST00000519587 SHFQ7M4L6 423 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms