RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 RSPO3Q9BXY4 272 aaPredicted RBP6.15□□□□□ -1.42
USP46-208ENST00000512656 KCNN2Q9H2S1 579 aa6.15□□□□□ -1.42
USP46-208ENST00000512656 IKZF5Q9H5V7 419 aa6.15□□□□□ -1.42
USP46-208ENST00000512656 SLC52A3Q9NQ40 469 aa6.15□□□□□ -1.42
USP46-208ENST00000512656 HINT3Q9NQE9 182 aaKnown RBP6.15□□□□□ -1.42
USP46-208ENST00000512656 TMEM38BQ9NVV0 291 aa6.15□□□□□ -1.42
USP46-208ENST00000512656 HIF1ANQ9NWT6 349 aa6.15□□□□□ -1.42
USP46-208ENST00000512656 ZNF224Q9NZL3 707 aa6.15□□□□□ -1.42
USP46-208ENST00000512656 STX18Q9P2W9 335 aaKnown RBP6.15□□□□□ -1.42
USP46-208ENST00000512656 CGGBP1Q9UFW8 167 aaPredicted RBP6.15□□□□□ -1.42
USP46-208ENST00000512656 NDUFAF1Q9Y375 327 aa6.15□□□□□ -1.42
USP46-208ENST00000512656 IQCMA0A1B0GVH7 501 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 A0A1W2PRG6 482 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 CENPBD1B2RD01 187 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 MCIDASD6RGH6 385 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 SNAP29O95721 258 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 LCKP06239 509 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 QDPRP09417 244 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 NAT2P11245 290 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 NR2C1P13056 603 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 ZNF250P15622 560 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 ITGA2P17301 1181 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 DRD4P21917 467 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 COL8A2P25067 703 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 PCGF2P35227 344 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 APLNRP35414 380 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 DAP3P51398 398 aaKnown RBP6.14□□□□□ -1.43
USP46-208ENST00000512656 SEC24CP53992 1094 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 MYBPC1Q00872 1141 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 SRSF2Q01130 221 aaKnown RBP6.14□□□□□ -1.43
USP46-208ENST00000512656 HSF2Q03933 536 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 NFYCQ13952 458 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 MAD2L1BPQ15013 274 aaPredicted RBP6.14□□□□□ -1.43
USP46-208ENST00000512656 NPTX1Q15818 432 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 DUSP7Q16829 419 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 FAM209AQ5JX71 171 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 BEND6Q5SZJ8 279 aaPredicted RBP6.14□□□□□ -1.43
USP46-208ENST00000512656 C12orf54Q6X4T0 127 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 DEF8Q6ZN54 512 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 SLC16A14Q7RTX9 510 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 LRP11Q86VZ4 500 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 MEX3DQ86XN8 651 aaKnown RBP6.14□□□□□ -1.43
USP46-208ENST00000512656 PTOV1Q86YD1 416 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 C10orf111Q8N326 155 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 RBM15BQ8NDT2 890 aaKnown RBP6.14□□□□□ -1.43
USP46-208ENST00000512656 OR4K5Q8NGD3 323 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 OR6T1Q8NGN1 323 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 ADAMTS16Q8TE57 1224 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 RAB39BQ96DA2 213 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 TIMD4Q96H15 378 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 SH3GL3Q99963 347 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 BCL2L14Q9BZR8 327 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 POLR2J2Q9GZM3 115 aaKnown RBP6.14□□□□□ -1.43
USP46-208ENST00000512656 RACGAP1Q9H0H5 632 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 PCDHAC1Q9H158 963 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 POLR2J3Q9H1A7 115 aaKnown RBP6.14□□□□□ -1.43
USP46-208ENST00000512656 NARFLQ9H6Q4 476 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 METTL17Q9H7H0 456 aaPredicted RBP6.14□□□□□ -1.43
USP46-208ENST00000512656 ZNF275Q9NSD4 429 aaPredicted RBP6.14□□□□□ -1.43
USP46-208ENST00000512656 DECR2Q9NUI1 292 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 NKIRAS2Q9NYR9 191 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 TAS2R5Q9NYW4 299 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 TREM2Q9NZC2 230 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 TAAR3PQ9P1P4 343 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 SLC7A7Q9UM01 511 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 FZR1Q9UM11 496 aa6.14□□□□□ -1.43
USP46-208ENST00000512656 MEGF8Q7Z7M0 2845 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 PKD1L1Q8TDX9 2849 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 IGLV3-9A0A075B6K5 115 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 ANKRD34BA5PLL1 514 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 HTR3EA5X5Y0 456 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 GMNCA6NCL1 334 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 C17orf100A8MU93 164 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 BLOC1S5-TXNDC5H3BN57 136 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 KPNA4O00629 521 aaPredicted RBP6.13□□□□□ -1.43
USP46-208ENST00000512656 TPD52L2O43399 206 aaKnown RBP6.13□□□□□ -1.43
USP46-208ENST00000512656 PNPP00491 289 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 IGF2P01344 180 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 OPN1SWP03999 348 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 PATE4P0C8F1 98 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 PGA4P0DJD7 388 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 PGA3P0DJD8 388 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 GAAP10253 952 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 RBM34P42696 430 aaKnown RBP6.13□□□□□ -1.43
USP46-208ENST00000512656 GUCA1AP43080 201 aaPredicted RBP6.13□□□□□ -1.43
USP46-208ENST00000512656 UCP2P55851 309 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 MTPNP58546 118 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 LMO4P61968 165 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 CYLC2Q14093 348 aaPredicted RBP6.13□□□□□ -1.43
USP46-208ENST00000512656 MELKQ14680 651 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 ACSM5Q6NUN0 579 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 FAHD2BQ6P2I3 314 aaPredicted RBP6.13□□□□□ -1.43
USP46-208ENST00000512656 WDR88Q6ZMY6 472 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 ZNF584Q8IVC4 421 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 WDFY1Q8IWB7 410 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 C1orf174Q8IYL3 243 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 ICA1LQ8NDH6 482 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 CPEB3Q8NE35 698 aaKnown RBP6.13□□□□□ -1.43
USP46-208ENST00000512656 GPR32P1Q8NGA4 272 aa6.13□□□□□ -1.43
USP46-208ENST00000512656 VANGL1Q8TAA9 524 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms