RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 LILRB1Q8NHL6 650 aaPredicted RBP6.32□□□□□ -1.4
GYPB-206ENST00000506516 TRMT61AQ96FX7 289 aaKnown RBP6.32□□□□□ -1.4
GYPB-206ENST00000506516 SAMD8Q96LT4 415 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 FEVQ99581 238 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 FOXC2Q99958 501 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 SH3GL3Q99963 347 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 DHRS9Q9BPW9 319 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 WACQ9BTA9 647 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 DGCR6LQ9BY27 220 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 C1orf198Q9H425 327 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 CXorf56Q9H5V9 222 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 CCNB1IP1Q9NPC3 277 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 B3GNT2Q9NY97 397 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 IL20Q9NYY1 176 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 PDP1Q9P0J1 537 aaPredicted RBP6.32□□□□□ -1.4
GYPB-206ENST00000506516 DNAJB9Q9UBS3 223 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 MOKQ9UQ07 419 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 LAMP3Q9UQV4 416 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 CSMD1Q96PZ7 3565 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 IQCMA0A1B0GVH7 501 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 A0A1W2PPL8 197 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 ARRDC5A6NEK1 342 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 C12orf71A8MTZ7 269 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 E7EQL1 145 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 H7C1C5 153 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 SLC16A7O60669 478 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 KHDRBS3O75525 346 aaKnown RBP6.31□□□□□ -1.4
GYPB-206ENST00000506516 PPP1R3DO95685 299 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 SERPINA5P05154 406 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 PATE4P0C8F1 98 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 FCGR1AP12314 374 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 ANXA8P13928 327 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 ATF4P18848 351 aaPredicted RBP6.31□□□□□ -1.4
GYPB-206ENST00000506516 CRABP1P29762 137 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 APOBEC3AP31941 199 aaPredicted RBP6.31□□□□□ -1.4
GYPB-206ENST00000506516 CDAP32320 146 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 TTKP33981 857 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 CDKN2AP42771 156 aaKnown RBP6.31□□□□□ -1.4
GYPB-206ENST00000506516 GIPRP48546 466 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 ERFP50548 548 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 FXYD6P3P58550 94 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 LCN6P62502 163 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 GALK2Q01415 458 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 NAAAQ02083 359 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 FMODQ06828 376 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 RAB39AQ14964 217 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 MESTQ5EB52 335 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 FAM27BQ5VT28 67 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 CD300LDQ6UXZ3 194 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 ZNF620Q6ZNG0 422 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 GLB1L2Q8IW92 636 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 LRRC75A-AS1Q8N1F1 130 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 CLDN22Q8N7P3 220 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 OR1J2Q8NGS2 313 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 WFDC12Q8WWY7 111 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 NEUROG1Q92886 237 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 SLCO4A1Q96BD0 722 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 RASD2Q96D21 266 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 NMD3Q96D46 503 aaKnown RBP6.31□□□□□ -1.4
GYPB-206ENST00000506516 NRBF2Q96F24 287 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 RAB3IPQ96QF0 476 aaPredicted RBP6.31□□□□□ -1.4
GYPB-206ENST00000506516 SNX18Q96RF0 628 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 BDH2Q9BUT1 245 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 TSSK6Q9BXA6 273 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 TEX12Q9BXU0 123 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 RERGLQ9H628 205 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 EGLN3Q9H6Z9 239 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 ARMC1Q9NVT9 282 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 VSX1Q9NZR4 365 aaPredicted RBP6.31□□□□□ -1.4
GYPB-206ENST00000506516 BAIAP2Q9UQB8 552 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 AP4S1Q9Y587 144 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 CDH10Q9Y6N8 788 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 ITPR2Q14571 2701 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 LRBAP50851 2863 aa6.31□□□□□ -1.4
GYPB-206ENST00000506516 PKDREJQ9NTG1 2253 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 CACNA1DQ01668 2161 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 IGKV1D-43A0A0B4J1Z2 117 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 ZNF503-AS2A6NEH8 195 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 H3BN98 237 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 TIPRLO75663 272 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 IFNGP01579 166 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 CST2P09228 141 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 DANCRP0C864 163 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 HIST1H1CP16403 213 aaKnown RBP6.3□□□□□ -1.4
GYPB-206ENST00000506516 ZNF14P17017 642 aaPredicted RBP6.3□□□□□ -1.4
GYPB-206ENST00000506516 MSR1P21757 451 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 FASP25445 335 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 LAP3P28838 519 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 APLNRP35414 380 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 CENPAP49450 140 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 NKX6-1P78426 367 aaPredicted RBP6.3□□□□□ -1.4
GYPB-206ENST00000506516 HSF2Q03933 536 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 SPOCK1Q08629 439 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 DAG1Q14118 895 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 ETFDHQ16134 617 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 TBC1D28Q2M2D7 210 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 CLEC12AQ5QGZ9 265 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 SLC35F1Q5T1Q4 408 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 SHEQ5VZ18 495 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 LEG1Q6P5S2 330 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms