RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ALKBH2Q6NS38 261 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 TMEM108Q6UXF1 575 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 ZBTB49Q6ZSB9 765 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 CYB561A3Q8NBI2 242 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 OR2T4Q8NH00 348 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 EME1Q96AY2 570 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 PLPPR2Q96GM1 343 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 TSSK2Q96PF2 358 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 SLC29A1Q99808 456 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 GABARAPL3Q9BY60 117 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 NMNAT2Q9BZQ4 307 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 ESRP2Q9H6T0 727 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 SEC61A2Q9H9S3 476 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 SRA1Q9HD15 236 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 RPRD1BQ9NQG5 326 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 POLE4Q9NR33 117 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 RASSF1Q9NS23 344 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 NPAP1Q9NZP6 1156 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 COA3Q9Y2R0 106 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 ITPR2Q14571 2701 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 APCP25054 2843 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 UNC79Q9P2D8 2635 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 SPG11Q96JI7 2443 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 LRBAP50851 2863 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 ZNF503-AS2A6NEH8 195 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 DPRXA6NFQ7 191 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 IGKV3-15P01624 115 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 HLA-HP01893 362 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 CST2P09228 141 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 CD79AP11912 226 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 MSR1P21757 451 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 PAICSP22234 425 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 PTAFRP25105 342 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 ARR3P36575 388 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 CAPZA2P47755 286 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 PTDSS1P48651 473 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 ZNF83P51522 516 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 LSM6P62312 80 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 RAB1AP62820 205 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 TUBA1BP68363 451 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 TUBA4AP68366 448 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 GLO1Q04760 184 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 GSG1Q2KHT4 349 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 SLC36A2Q495M3 483 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 C4orf48Q5BLP8 95 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 SLX4IPQ5VYV7 408 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 TUBA1AQ71U36 451 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 SLC16A14Q7RTX9 510 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 SYT9Q86SS6 491 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 MDP1Q86V88 176 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 LRRC18Q8N456 261 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 FGFBP3Q8TAT2 258 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 HTRA1Q92743 480 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 PIK3IP1Q96FE7 263 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 ZNF75AQ96N20 296 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 SLC38A2Q96QD8 506 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 SH3GL3Q99963 347 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 WACQ9BTA9 647 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 C1QTNF6Q9BXI9 259 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 PRRG3Q9BZD7 231 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 KCNN2Q9H2S1 579 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 FN3KQ9H479 309 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 RERGLQ9H628 205 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 C8orf4Q9NR00 106 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 ABCA12Q86UK0 2595 aa10.37□□□□□ -0.75
PDLIM5-208ENST00000504489 ANKRD17O75179 2603 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 E9PQ18 207 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 H0YHG0 523 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 M0R1B8 84 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 CASQ2O14958 399 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 RRP9O43818 475 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 SCG5P05408 212 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 MMP7P09237 267 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 GAAP10253 952 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 PRF1P14222 555 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 CD40P25942 277 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 POLR2IP36954 125 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 PCBD1P61457 104 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 EFNB1P98172 346 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 HSF2Q03933 536 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 PIGFQ07326 219 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 BSPH1Q075Z2 132 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 ENDOGQ14249 297 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 TRIP10Q15642 601 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 SNAPC1Q16533 368 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 C12orf73Q69YU5 71 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 TMEM53Q6P2H8 277 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 IL17RDQ8NFM7 739 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 SLC26A10Q8NG04 563 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 PTP4A1Q93096 173 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 FBXO17Q96EF6 278 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 PLEKHA8Q96JA3 519 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 TMEM204Q9BSN7 226 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 ZNF416Q9BWM5 594 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 GRIP2Q9C0E4 1043 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 RIBC2Q9H4K1 309 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 NOX3Q9HBY0 568 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 TVP23BQ9NYZ1 205 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 FBXL3Q9UKT7 428 aa10.36□□□□□ -0.75
PDLIM5-208ENST00000504489 IGHV1-18A0A0C4DH31 117 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms