RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 C17orf50Q8WW18 174 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.88□□□□□ -1.95
VPS36-206ENST00000497149 FAM3DQ96BQ1 224 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 CCDC126Q96EE4 140 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 TSNARE1Q96NA8 513 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 CENPKQ9BS16 269 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 CHAC1Q9BUX1 264 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 FANCEQ9HB96 536 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 FGF20Q9NP95 211 aaPredicted RBP2.88□□□□□ -1.95
VPS36-206ENST00000497149 CYTL1Q9NRR1 136 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 ZNF629Q9UEG4 869 aaPredicted RBP2.88□□□□□ -1.95
VPS36-206ENST00000497149 PSG8Q9UQ74 426 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 TET2Q6N021 2002 aaPredicted RBP2.88□□□□□ -1.95
VPS36-206ENST00000497149 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.87□□□□□ -1.95
VPS36-206ENST00000497149 IGHV5-51A0A0C4DH38 117 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 LRRIQ4A6NIV6 560 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 INS-IGF2F8WCM5 200 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 CDC7O00311 574 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 RAB29O14966 203 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 SPOPO43791 374 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 ENTPD5O75356 428 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 YEATS4O95619 227 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 RAB3DO95716 219 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 AIFM1O95831 613 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 TSPAN13O95857 204 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 RETP07949 1114 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 TROVE2P10155 538 aaKnown RBP eCLIP2.87□□□□□ -1.95
VPS36-206ENST00000497149 IGFBP3P17936 291 aaPredicted RBP2.87□□□□□ -1.95
VPS36-206ENST00000497149 AQP2P41181 271 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 ACLYP53396 1101 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 TWF1Q12792 350 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 TCP10Q12799 353 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 C16orf72Q14CZ0 275 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 UBE2SQ16763 222 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 FAM83EQ2M2I3 478 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 XKR7Q5GH72 579 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 IGFL3Q6UXB1 125 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 OAFQ86UD1 273 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 MMAAQ8IVH4 418 aaKnown RBP2.87□□□□□ -1.95
VPS36-206ENST00000497149 OR10G2Q8NGC3 310 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 OR52K1Q8NGK4 314 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 NRBF2Q96F24 287 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 ZNF396Q96N95 335 aaPredicted RBP2.87□□□□□ -1.95
VPS36-206ENST00000497149 OR2A5Q96R48 311 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 LZTS2Q9BRK4 669 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 IQCGQ9H095 443 aaKnown RBP2.87□□□□□ -1.95
VPS36-206ENST00000497149 RACGAP1Q9H0H5 632 aa2.87□□□□□ -1.95
VPS36-206ENST00000497149 CHTOPQ9Y3Y2 248 aaKnown RBP2.87□□□□□ -1.95
VPS36-206ENST00000497149 ZNF816-ZNF321PA0A0X1KG74 233 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 H0YIV9 168 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 CLPXO76031 633 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 SRP72O76094 671 aaKnown RBP2.86□□□□□ -1.95
VPS36-206ENST00000497149 WISP3O95389 354 aaPredicted RBP2.86□□□□□ -1.95
VPS36-206ENST00000497149 FABP3P05413 133 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 S100A9P06702 114 aaKnown RBP2.86□□□□□ -1.95
VPS36-206ENST00000497149 ZNF250P15622 560 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 ZNF24P17028 368 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 GDI1P31150 447 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 FOXN2P32314 431 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 NAA10P41227 235 aaPredicted RBP2.86□□□□□ -1.95
VPS36-206ENST00000497149 TMED10P49755 219 aaKnown RBP2.86□□□□□ -1.95
VPS36-206ENST00000497149 EIF4EBP1Q13541 118 aaPredicted RBP2.86□□□□□ -1.95
VPS36-206ENST00000497149 WDR43Q15061 677 aaKnown RBP eCLIP2.86□□□□□ -1.95
VPS36-206ENST00000497149 ZSCAN26Q16670 478 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 SLC8B1Q6J4K2 584 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 DUX4L9Q6RFH8 374 aaPredicted RBP2.86□□□□□ -1.95
VPS36-206ENST00000497149 NCCRP1Q6ZVX7 275 aaPredicted RBP2.86□□□□□ -1.95
VPS36-206ENST00000497149 FAM184AQ8NB25 1140 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 OR7G2Q8NG99 324 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 RAB3IL1Q8TBN0 382 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 SLC7A13Q8TCU3 470 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 RNF139Q8WU17 664 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 KIFAP3Q92845 792 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 CREB3L1Q96BA8 519 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 ATP6V1G3Q96LB4 118 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 SERPINB12Q96P63 405 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 PLIN2Q99541 437 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 NUP58Q9BVL2 599 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 OR51M1Q9H341 326 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 RPP21Q9H633 154 aaKnown RBP2.86□□□□□ -1.95
VPS36-206ENST00000497149 ISYNA1Q9NPH2 558 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 KCNJ16Q9NPI9 418 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 DDX18Q9NVP1 670 aaKnown RBP2.86□□□□□ -1.95
VPS36-206ENST00000497149 NOSIPQ9Y314 301 aaKnown RBP2.86□□□□□ -1.95
VPS36-206ENST00000497149 GOLT1BQ9Y3E0 138 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 MROH7-TTC4A0A0A0MT08 1334 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 EIF4G1Q04637 1599 aaKnown RBP2.86□□□□□ -1.95
VPS36-206ENST00000497149 PIKFYVEQ9Y2I7 2098 aa2.86□□□□□ -1.95
VPS36-206ENST00000497149 AKNAQ7Z591 1439 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 IGKV2-28A0A075B6P5 120 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 A0A1B0GVX0 72 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 LRRIQ3A6PVS8 624 aaPredicted RBP2.85□□□□□ -1.95
VPS36-206ENST00000497149 CETN3O15182 167 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 CLOCKO15516 846 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 NMT2O60551 498 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 DPM1O60762 260 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 PAHP00439 452 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 IGKV2D-28P01615 120 aa2.85□□□□□ -1.95
VPS36-206ENST00000497149 UBTFL6P0CB48 400 aaPredicted RBP2.85□□□□□ -1.95
VPS36-206ENST00000497149 PGAM1P18669 254 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms