RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 DTX1Q86Y01 620 aa7.49□□□□□ -1.21
USP54-215ENST00000497106 CDC20BQ86Y33 519 aa7.49□□□□□ -1.21
USP54-215ENST00000497106 OR5L1Q8NGL2 311 aa7.49□□□□□ -1.21
USP54-215ENST00000497106 ZNF519Q8TB69 540 aa7.49□□□□□ -1.21
USP54-215ENST00000497106 CPT1CQ8TCG5 803 aa7.49□□□□□ -1.21
USP54-215ENST00000497106 GHSRQ92847 366 aa7.49□□□□□ -1.21
USP54-215ENST00000497106 PTP4A1Q93096 173 aa7.49□□□□□ -1.21
USP54-215ENST00000497106 SPRY4Q9C004 299 aa7.49□□□□□ -1.21
USP54-215ENST00000497106 RBM38Q9H0Z9 239 aaKnown RBP7.49□□□□□ -1.21
USP54-215ENST00000497106 SLCO5A1Q9H2Y9 848 aa7.49□□□□□ -1.21
USP54-215ENST00000497106 TMEM200CA6NKL6 621 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 PTGDSP41222 190 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 IL18Q14116 193 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 STK11Q15831 433 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 C1QL3Q5VWW1 255 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 TRILQ7L0X0 811 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 ZBTB46Q86UZ6 589 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 KDM8Q8N371 416 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 LRRC75AQ8NAA5 344 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 NMNAT2Q9BZQ4 307 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 ZNF703Q9H7S9 590 aaPredicted RBP7.48□□□□□ -1.21
USP54-215ENST00000497106 FAIMQ9NVQ4 179 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 RP1P56715 2156 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 ISPDA4D126 451 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 METTL21EPA6NDL7 271 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 PLPP2O43688 288 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 SNRNP200O75643 2136 aaKnown RBP7.48□□□□□ -1.21
USP54-215ENST00000497106 FOXK1P85037 733 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 SPCS2Q15005 226 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 OR7E24Q6IFN5 339 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 METAP1DQ6UB28 335 aaPredicted RBP7.48□□□□□ -1.21
USP54-215ENST00000497106 ZNF813Q6ZN06 617 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 TMEM251Q8N6I4 163 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 POC1BQ8TC44 478 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 SLAMF6Q96DU3 332 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 EMC6Q9BV81 110 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 CALHM2Q9HA72 323 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 COMMD3Q9UBI1 195 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 SLC7A11Q9UPY5 501 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 DCDC2BA2VCK2 349 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 E9PQ18 207 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 NTN1O95631 604 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 PTBP1P26599 531 aaKnown RBP eCLIP7.48□□□□□ -1.21
USP54-215ENST00000497106 PSMB10P40306 273 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 MAGEA5P43359 124 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 TEX30Q5JUR7 227 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 LIPNQ5VXI9 398 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 NKAIN3Q8N8D7 197 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 ADAMTS17Q8TE56 1095 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 AKAP1Q92667 903 aaKnown RBP eCLIP7.48□□□□□ -1.21
USP54-215ENST00000497106 PHOX2BQ99453 314 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 BRD7Q9NPI1 651 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 ZNF391Q9UJN7 358 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 OR52A1Q9UKL2 312 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 PCDHGA9Q9Y5G4 932 aaKnown RBP7.48□□□□□ -1.21
USP54-215ENST00000497106 PRRG2O14669 202 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 WNT11O96014 354 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 MNDAP41218 407 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 ZNF181Q2M3W8 571 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 ZNF57Q68EA5 555 aaPredicted RBP7.48□□□□□ -1.21
USP54-215ENST00000497106 ASB18Q6ZVZ8 466 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 PGAP1Q75T13 922 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 FAM122BQ7Z309 247 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 SHISA5Q8N114 240 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 SPERTQ8NA61 448 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 OR5D14Q8NGL3 314 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 ENKURQ8TC29 256 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 SLC6A15Q9H2J7 730 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 OPA3Q9H6K4 179 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 CDH20Q9HBT6 801 aa7.48□□□□□ -1.21
USP54-215ENST00000497106 NOTOA8MTQ0 251 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 DKK1O94907 266 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 SLC2A5P22732 501 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 ARL6IP1Q15041 203 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 RAB11BQ15907 218 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 ZNF239Q16600 458 aaKnown RBP7.47□□□□□ -1.21
USP54-215ENST00000497106 KRTCAP3Q53RY4 240 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 B3GLCTQ6Y288 498 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 CREB3L2Q70SY1 520 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 OR6V1Q8N148 313 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 SUN5Q8TC36 379 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 RNF128Q8TEB7 428 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 C11orf40Q8WZ69 217 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 MCHR2Q969V1 340 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 DACT3Q96B18 629 aaPredicted RBP7.47□□□□□ -1.21
USP54-215ENST00000497106 S100A16Q96FQ6 103 aaKnown RBP7.47□□□□□ -1.21
USP54-215ENST00000497106 TTLL8A6PVC2 850 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 SGCEO43556 437 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 YES1P07947 543 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 CLUP10909 449 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 RAB3AP20336 220 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 DCTDP32321 178 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 SOX2P48431 317 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 RAB35Q15286 201 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 CNN3Q15417 329 aaKnown RBP7.47□□□□□ -1.21
USP54-215ENST00000497106 TGIF1Q15583 401 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 ZMAT1Q5H9K5 638 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 TEX19Q8NA77 164 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 OR6Q1Q8NGQ2 317 aa7.47□□□□□ -1.21
USP54-215ENST00000497106 SGCDQ92629 289 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms