RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 KCNS3Q9BQ31 491 aa14.55□□□□□ -0.08
HLA-A-208ENST00000496081 PDCD1LG2Q9BQ51 273 aa14.55□□□□□ -0.08
HLA-A-208ENST00000496081 PPIL3Q9H2H8 161 aaKnown RBP14.55□□□□□ -0.08
HLA-A-208ENST00000496081 PLGRKTQ9HBL7 147 aa14.55□□□□□ -0.08
HLA-A-208ENST00000496081 A0A075B6Q4 140 aa14.55□□□□□ -0.08
HLA-A-208ENST00000496081 CLDN25C9JDP6 229 aa14.55□□□□□ -0.08
HLA-A-208ENST00000496081 AQP8O94778 261 aa14.55□□□□□ -0.08
HLA-A-208ENST00000496081 QDPRP09417 244 aa14.55□□□□□ -0.08
HLA-A-208ENST00000496081 CLDN18P56856 261 aa14.55□□□□□ -0.08
HLA-A-208ENST00000496081 RPS11P62280 158 aaKnown RBP eCLIP14.55□□□□□ -0.08
HLA-A-208ENST00000496081 ROM1Q03395 351 aa14.55□□□□□ -0.08
HLA-A-208ENST00000496081 MRPL28Q13084 256 aaKnown RBP14.55□□□□□ -0.08
HLA-A-208ENST00000496081 ACSM3Q53FZ2 586 aa14.55□□□□□ -0.08
HLA-A-208ENST00000496081 CEACAM19Q7Z692 300 aa14.55□□□□□ -0.08
HLA-A-208ENST00000496081 ZNF679Q8IYX0 411 aa14.55□□□□□ -0.08
HLA-A-208ENST00000496081 C11orf40Q8WZ69 217 aa14.55□□□□□ -0.08
HLA-A-208ENST00000496081 ROBO4Q8WZ75 1007 aa14.55□□□□□ -0.08
HLA-A-208ENST00000496081 ZNF845Q96IR2 970 aaPredicted RBP14.55□□□□□ -0.08
HLA-A-208ENST00000496081 QPCTLQ9NXS2 382 aa14.55□□□□□ -0.08
HLA-A-208ENST00000496081 KCNMB2Q9Y691 235 aa14.55□□□□□ -0.08
HLA-A-208ENST00000496081 A0A1W2PPL8 197 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 SMIM30A4D0T7 59 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 ZNF716A6NP11 495 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 HSPB2A8KAH6 182 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 CASKO14936 926 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 ZNF432O94892 652 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 ZFPL1O95159 310 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 WNT11O96014 354 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 BMP4P12644 408 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 HNRNPA0Q13151 305 aaKnown RBP14.54□□□□□ -0.08
HLA-A-208ENST00000496081 ALKBH1Q13686 389 aaKnown RBP14.54□□□□□ -0.08
HLA-A-208ENST00000496081 HSPB2Q16082 182 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 PDSS1Q5T2R2 415 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 FAM27D1Q5T7N8 215 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 ABLIM2Q6H8Q1 611 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 KCTD18Q6PI47 426 aaPredicted RBP14.54□□□□□ -0.08
HLA-A-208ENST00000496081 SLC22A16Q86VW1 577 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 LINC00346Q8IVM7 164 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 TMEM123Q8N131 208 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 MFSD4AQ8N468 514 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 TMEM54Q969K7 222 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 CPNE4Q96A23 557 aaPredicted RBP14.54□□□□□ -0.08
HLA-A-208ENST00000496081 MAP6Q96JE9 813 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 MROQ9BYG7 248 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 ELOVL3Q9HB03 270 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 GLTPQ9NZD2 209 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 FRRS1LQ9P0K9 344 aa14.54□□□□□ -0.08
HLA-A-208ENST00000496081 PLEKHB1Q9UF11 243 aaPredicted RBP14.54□□□□□ -0.08
HLA-A-208ENST00000496081 A0A087WV48 116 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 A0A1B0GTH9 108 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 J3QRK9 145 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 GPRIN2O60269 458 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 CEACAM4O75871 244 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 SERPINA3P01011 423 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 ITGB2P05107 769 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 ZNF708P17019 499 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 CALRP27797 417 aaKnown RBP14.53□□□□□ -0.08
HLA-A-208ENST00000496081 CSNK1A1P48729 337 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 PHYHD1Q5SRE7 291 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 SPATC1Q76KD6 591 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 DCXRQ7Z4W1 244 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 KRT77Q7Z794 578 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 OR52N5Q8NH56 324 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 ST7LQ8TDW4 575 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 S100ZQ8WXG8 99 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 BORCS5Q969J3 196 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 HMG20AQ9NP66 347 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 ACKR4Q9NPB9 350 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 TIGARQ9NQ88 270 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 FLVCR1Q9Y5Y0 555 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 PEX16Q9Y5Y5 336 aa14.53□□□□□ -0.08
HLA-A-208ENST00000496081 CTDSP2O14595 271 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 KLK10O43240 276 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 NR2C1P13056 603 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 CDAP32320 146 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 MTNR1BP49286 362 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 SELENOPP49908 381 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 CAV3P56539 151 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 SRYQ05066 204 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 ZNF846Q147U1 533 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 SLC10A1Q14973 349 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 ZMAT1Q5H9K5 638 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 RNFT1Q5M7Z0 435 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 FAM109AQ8N4B1 249 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 OR10H5Q8NGA6 315 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 OR6N1Q8NGY5 312 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 OR2G2Q8NGZ5 317 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 ZNF775Q96BV0 537 aaPredicted RBP14.52□□□□□ -0.08
HLA-A-208ENST00000496081 SCNM1Q9BWG6 230 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 SEC61A2Q9H9S3 476 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 ZNF281Q9Y2X9 895 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 ZNF407Q9C0G0 2248 aa14.52□□□□□ -0.08
HLA-A-208ENST00000496081 PHF3Q92576 2039 aaKnown RBP14.52□□□□□ -0.09
HLA-A-208ENST00000496081 IQCMA0A1B0GVH7 501 aa14.52□□□□□ -0.09
HLA-A-208ENST00000496081 TMCC2O75069 709 aa14.52□□□□□ -0.09
HLA-A-208ENST00000496081 S100A5P33763 92 aa14.52□□□□□ -0.09
HLA-A-208ENST00000496081 NTF4P34130 210 aa14.52□□□□□ -0.09
HLA-A-208ENST00000496081 ZNF133P52736 654 aaPredicted RBP14.52□□□□□ -0.09
HLA-A-208ENST00000496081 INAQ16352 499 aa14.52□□□□□ -0.09
HLA-A-208ENST00000496081 FDX2Q6P4F2 183 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms