RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 IGKV1D-43A0A0B4J1Z2 117 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 TRBV5-5A0A0J9YX44 114 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 SPAARA0A1B0GVQ0 90 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 ANKRD61A6NGH8 418 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 ZNF726A6NNF4 738 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 PDCD5O14737 125 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 TMEM127O75204 238 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 ZNF254O75437 659 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 MPZL1O95297 269 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 NR2C1P13056 603 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 ITGA3P26006 1051 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 LAP3P28838 519 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 RBMS1P29558 406 aaKnown RBP12.52□□□□□ -0.41
PTPN7-216ENST00000492977 THBS2P35442 1172 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 AGFG1P52594 562 aaKnown RBP12.52□□□□□ -0.41
PTPN7-216ENST00000492977 RIDAP52758 137 aaKnown RBP12.52□□□□□ -0.41
PTPN7-216ENST00000492977 OR10A3P58181 314 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 GPR85P60893 370 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 GABREP78334 506 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 CAMK2DQ13557 499 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 HIST3H3Q16695 136 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 DEGS2Q6QHC5 323 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 LRRN1Q6UXK5 716 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 LRRC69Q6ZNQ3 347 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 SLC22A16Q86VW1 577 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 DTX1Q86Y01 620 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 OR8H2Q8N162 312 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 POC5Q8NA72 575 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 PLPP7Q8NBV4 271 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 PRSS33Q8NF86 280 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 OR14L1PQ8NHC6 308 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 C4orf45Q96LM5 186 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 DERL3Q96Q80 235 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 UTP23Q9BRU9 249 aaKnown RBP12.52□□□□□ -0.41
PTPN7-216ENST00000492977 DEPPQ9NTK1 212 aa12.52□□□□□ -0.41
PTPN7-216ENST00000492977 BOKQ9UMX3 212 aaPredicted RBP12.52□□□□□ -0.41
PTPN7-216ENST00000492977 A0A0J9YW62 118 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 A0A1W2PPK0 400 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 CDRT15L2A8MXV6 281 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 PIN1P1O15428 100 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 RAMP1O60894 148 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 PFDN1O60925 122 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 PTTG1O95997 202 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 RAF1P04049 648 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 APEX1P27695 318 aaKnown RBP12.51□□□□□ -0.41
PTPN7-216ENST00000492977 RAC3P60763 192 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 CDC20Q12834 499 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 CEP78Q5JTW2 689 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 CNIH2Q6PI25 160 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 SLC25A47Q6Q0C1 308 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 ASB18Q6ZVZ8 466 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 YRDCQ86U90 279 aaKnown RBP12.51□□□□□ -0.41
PTPN7-216ENST00000492977 PRSS35Q8N3Z0 413 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 ZNF676Q8N7Q3 588 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 CLEC1AQ8NC01 280 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 OR10H5Q8NGA6 315 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 SETD6Q8TBK2 473 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 GPR148Q8TDV2 347 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 ABTB1Q969K4 478 aaPredicted RBP12.51□□□□□ -0.41
PTPN7-216ENST00000492977 FAM173AQ9BQD7 235 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 OR2B2Q9GZK3 357 aa12.51□□□□□ -0.41
PTPN7-216ENST00000492977 TRABD2BA6NFA1 517 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 LINC01387J3KSC0 135 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 GPR171O14626 319 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 NEURL1O76050 574 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 RFPL3SP0C7P2 107 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 EPXP11678 715 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 FOXO1Q12778 655 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 RIN1Q13671 783 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 WDR38Q5JTN6 314 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 OTPQ5XKR4 325 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 SPINK14Q6IE38 97 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 CREB3L2Q70SY1 520 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 DCXRQ7Z4W1 244 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 LRRC28Q86X40 367 aaPredicted RBP12.5□□□□□ -0.41
PTPN7-216ENST00000492977 ST7LQ8TDW4 575 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 C11orf40Q8WZ69 217 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPN7-216ENST00000492977 SLITRK2Q9H156 845 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 PPP1R3EQ9H7J1 279 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 CYSLTR2Q9NS75 346 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 C14orf119Q9NWQ9 140 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 ABRACLQ9P1F3 81 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 LRP12Q9Y561 859 aa12.5□□□□□ -0.41
PTPN7-216ENST00000492977 A0A1B0GTH9 108 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 ACOD1A6NK06 481 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 FAM25AB3EWG3 89 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 FAM25CB3EWG5 89 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 FAM25GB3EWG6 89 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 NPIPA2E9PIF3 369 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 NPIPA3F8WFD2 350 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 TNFSF11O14788 317 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 KLK2P20151 261 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 GDF1P27539 372 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 NBL1P41271 181 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 KIR3DL2P43630 455 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 CLDN17P56750 224 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 SLC25A35Q3KQZ1 300 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 PYDC2Q56P42 97 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 LCE2DQ5TA82 110 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms