RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 ZNF584Q8IVC4 421 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 GLB1L2Q8IW92 636 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 NUP37Q8NFH4 326 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 OR2T33Q8NG76 320 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 OR52E2Q8NGJ4 325 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 TEX47Q8TBZ9 253 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 FBXO17Q96EF6 278 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 NRBF2Q96F24 287 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 FOXN4Q96NZ1 517 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 TRAF4Q9BUZ4 470 aaPredicted RBP14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 C1orf198Q9H425 327 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 NTN4Q9HB63 628 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 BAIAP2Q9UQB8 552 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 COA3Q9Y2R0 106 aaPredicted RBP14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 IQCMA0A1B0GVH7 501 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 SCG5P05408 212 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 ZNF32P17041 273 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 PRKACGP22612 351 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 APOBEC3AP31941 199 aaPredicted RBP14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 TTKP33981 857 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 PCBD1P61457 104 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 HGFACQ04756 655 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 PLP2Q04941 152 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 ENDOGQ14249 297 aaKnown RBP14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 LRRC75A-AS1Q8N1F1 130 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 MUC15Q8N387 334 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 LNX2Q8N448 690 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 ATG16L2Q8NAA4 619 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 SLC30A7Q8NEW0 376 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 OR4Q3Q8NH05 313 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 OR5K1Q8NHB7 308 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 TSSK2Q96PF2 358 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 BDH2Q9BUT1 245 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 ZNF416Q9BWM5 594 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 RACGAP1Q9H0H5 632 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 RPRD1BQ9NQG5 326 aaKnown RBP14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 CA10Q9NS85 328 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 CBLN4Q9NTU7 201 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 KIF17Q9P2E2 1029 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 REV1Q9UBZ9 1251 aa14.1□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 DSCAMO60469 2012 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 CADP27708 2225 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 IGLV1-36A0A0B4J1U3 117 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 C12orf71A8MTZ7 269 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 H3BN98 237 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 DCTN6O00399 190 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 CD8AP01732 235 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 ZNF35P13682 527 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 PTH2RP49190 550 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 ACTR3P61158 418 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 DAG1Q14118 895 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 KPNB1Q14974 876 aaKnown RBP14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 TBC1D28Q2M2D7 210 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 SLC36A3Q495N2 470 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 PABPC1L2AQ5JQF8 200 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 C11orf71Q6IPW1 123 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 KRT80Q6KB66 452 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 VHLLQ6RSH7 139 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 YTHDF3Q7Z739 585 aaKnown RBP14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 SYT9Q86SS6 491 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 NPEPL1Q8NDH3 523 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 DNAJC9Q8WXX5 260 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 LRTOMTQ8WZ04 291 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 PERPQ96FX8 193 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 RAB3IPQ96QF0 476 aaPredicted RBP14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 WACQ9BTA9 647 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 GSX2Q9BZM3 304 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 GRIP2Q9C0E4 1043 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 FN3KQ9H479 309 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 SRA1Q9HD15 236 aaKnown RBP14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 EMC7Q9NPA0 242 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 KLHL21Q9UJP4 597 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 B9D1Q9UPM9 204 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 FKBP7Q9Y680 259 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 SPG11Q96JI7 2443 aa14.09□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 AKAP6Q13023 2319 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 OR6C68A6NDL8 312 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 OVOL3O00110 214 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 OSMP13725 252 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 PAX1P15863 534 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 APLNRP35414 380 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 CENPAP49450 140 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 LSM6P62312 80 aaKnown RBP14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 PSG4Q00888 419 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 GALK2Q01415 458 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 SNTB2Q13425 540 aaKnown RBP14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 UGT2A3Q6UWM9 527 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 AMIGO2Q86SJ2 522 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 HIPK1Q86Z02 1210 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 OR6V1Q8N148 313 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 CYB561A3Q8NBI2 242 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 SLC37A3Q8NCC5 494 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 OR1J2Q8NGS2 313 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 C11orf40Q8WZ69 217 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 OR2H1Q9GZK4 316 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 WNT5BQ9H1J7 359 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 ZNF442Q9H7R0 627 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 CDH20Q9HBT6 801 aa14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 ZNF701Q9NV72 531 aaPredicted RBP14.08□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 SPEF1Q9Y4P9 236 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms