RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 TAS2R43P59537 309 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 EGR3Q06889 387 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 PCK2Q16822 640 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 ZNF684Q5T5D7 378 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 C19orf48Q6RUI8 117 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 PLEKHG7Q6ZR37 379 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 FOXL2NBQ6ZUU3 175 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 P4HA3Q7Z4N8 544 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 ATCAYQ86WG3 371 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 ZFP41Q8N8Y5 198 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 Q8NA96 180 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 TTYH2Q9BSA4 534 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 CALHM2Q9HA72 323 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 GP6Q9HCN6 339 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 CLEC4AQ9UMR7 237 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 ZNHIT1O43257 154 aa19.14■□□□□ 0.65
SMC4-221ENST00000489573 NR4A1P22736 598 aa19.14■□□□□ 0.65
SMC4-221ENST00000489573 CDAP32320 146 aa19.14■□□□□ 0.65
SMC4-221ENST00000489573 ZNF84P51523 738 aa19.14■□□□□ 0.65
SMC4-221ENST00000489573 EIF2B1Q14232 305 aaKnown RBP19.14■□□□□ 0.65
SMC4-221ENST00000489573 KCNMB1Q16558 191 aa19.14■□□□□ 0.65
SMC4-221ENST00000489573 CTF1Q16619 201 aa19.14■□□□□ 0.65
SMC4-221ENST00000489573 TIMM50Q3ZCQ8 353 aa19.14■□□□□ 0.65
SMC4-221ENST00000489573 KRTCAP3Q53RY4 240 aa19.14■□□□□ 0.65
SMC4-221ENST00000489573 FAM220AQ7Z4H9 259 aa19.14■□□□□ 0.65
SMC4-221ENST00000489573 KCTD20Q7Z5Y7 419 aa19.14■□□□□ 0.65
SMC4-221ENST00000489573 EGFL6Q8IUX8 553 aa19.14■□□□□ 0.65
SMC4-221ENST00000489573 OR5M9Q8NGP3 310 aa19.14■□□□□ 0.65
SMC4-221ENST00000489573 PELI1Q96FA3 418 aa19.14■□□□□ 0.65
SMC4-221ENST00000489573 TRIB1Q96RU8 372 aa19.14■□□□□ 0.65
SMC4-221ENST00000489573 POLE4Q9NR33 117 aa19.14■□□□□ 0.65
SMC4-221ENST00000489573 PNMA8CA0A1B0GUJ8 204 aa19.13■□□□□ 0.65
SMC4-221ENST00000489573 TMCC2O75069 709 aa19.13■□□□□ 0.65
SMC4-221ENST00000489573 KRT8P05787 483 aa19.13■□□□□ 0.65
SMC4-221ENST00000489573 GBX2P52951 348 aaPredicted RBP19.13■□□□□ 0.65
SMC4-221ENST00000489573 RIPPLY2Q5TAB7 128 aa19.13■□□□□ 0.65
SMC4-221ENST00000489573 ZNF324BQ6AW86 544 aaPredicted RBP19.13■□□□□ 0.65
SMC4-221ENST00000489573 FGD2Q7Z6J4 655 aa19.13■□□□□ 0.65
SMC4-221ENST00000489573 ALKBH3Q96Q83 286 aaPredicted RBP19.13■□□□□ 0.65
SMC4-221ENST00000489573 AMELYQ99218 206 aa19.13■□□□□ 0.65
SMC4-221ENST00000489573 CDADC1Q9BWV3 514 aa19.13■□□□□ 0.65
SMC4-221ENST00000489573 RBM24Q9BX46 236 aaKnown RBP19.13■□□□□ 0.65
SMC4-221ENST00000489573 LINC00470Q9BZP3 86 aa19.13■□□□□ 0.65
SMC4-221ENST00000489573 SLCO5A1Q9H2Y9 848 aa19.13■□□□□ 0.65
SMC4-221ENST00000489573 ACOXLQ9NUZ1 547 aa19.13■□□□□ 0.65
SMC4-221ENST00000489573 IKZF2Q9UKS7 526 aa19.13■□□□□ 0.65
SMC4-221ENST00000489573 CACNA1BQ00975 2339 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 METTL15A6NJ78 407 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 OR6C65A6NJZ3 312 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 AHRRA9YTQ3 701 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 E9PI62 339 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 PSMD9O00233 223 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 AIREO43918 545 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 SULT1C4O75897 302 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 TACSTD2P09758 323 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 OR8G3PP0DMU2 310 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 CELP19835 753 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 GUCA1AP43080 201 aaPredicted RBP19.12■□□□□ 0.65
SMC4-221ENST00000489573 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.12■□□□□ 0.65
SMC4-221ENST00000489573 LINC00346Q8IVM7 164 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 RPL3LQ92901 407 aaKnown RBP19.12■□□□□ 0.65
SMC4-221ENST00000489573 OR8B4Q96RC9 309 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 ABHD6Q9BV23 337 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 OR51E2Q9H255 320 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 EMC7Q9NPA0 242 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 MRM2Q9UI43 246 aaKnown RBP19.12■□□□□ 0.65
SMC4-221ENST00000489573 POLR1DQ9Y2S0 133 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 IGF2RP11717 2491 aa19.12■□□□□ 0.65
SMC4-221ENST00000489573 DMXL2Q8TDJ6 3036 aa19.11■□□□□ 0.65
SMC4-221ENST00000489573 ABHD16AO95870 558 aa19.11■□□□□ 0.65
SMC4-221ENST00000489573 MSR1P21757 451 aa19.11■□□□□ 0.65
SMC4-221ENST00000489573 PSMA1P25786 263 aaKnown RBP19.11■□□□□ 0.65
SMC4-221ENST00000489573 GPR50Q13585 617 aa19.11■□□□□ 0.65
SMC4-221ENST00000489573 ACSF3Q4G176 576 aaPredicted RBP19.11■□□□□ 0.65
SMC4-221ENST00000489573 KCTD18Q6PI47 426 aaPredicted RBP19.11■□□□□ 0.65
SMC4-221ENST00000489573 YIPF7Q8N8F6 280 aa19.11■□□□□ 0.65
SMC4-221ENST00000489573 OR52N5Q8NH56 324 aa19.11■□□□□ 0.65
SMC4-221ENST00000489573 CPT1CQ8TCG5 803 aa19.11■□□□□ 0.65
SMC4-221ENST00000489573 GMPPAQ96IJ6 420 aaPredicted RBP19.11■□□□□ 0.65
SMC4-221ENST00000489573 NELFAQ9H3P2 528 aa19.11■□□□□ 0.65
SMC4-221ENST00000489573 PRORYQ9H606 182 aa19.11■□□□□ 0.65
SMC4-221ENST00000489573 CRLF2Q9HC73 371 aa19.11■□□□□ 0.65
SMC4-221ENST00000489573 GLRX2Q9NS18 164 aa19.11■□□□□ 0.65
SMC4-221ENST00000489573 CYB5R1Q9UHQ9 305 aa19.11■□□□□ 0.65
SMC4-221ENST00000489573 GRIP1Q9Y3R0 1128 aa19.11■□□□□ 0.65
SMC4-221ENST00000489573 SIRT4Q9Y6E7 314 aaPredicted RBP19.11■□□□□ 0.65
SMC4-221ENST00000489573 HSPB2A8KAH6 182 aa19.1■□□□□ 0.65
SMC4-221ENST00000489573 KRT33AO76009 404 aa19.1■□□□□ 0.65
SMC4-221ENST00000489573 ATE1O95260 518 aa19.1■□□□□ 0.65
SMC4-221ENST00000489573 AGTR1P30556 359 aa19.1■□□□□ 0.65
SMC4-221ENST00000489573 ROM1Q03395 351 aa19.1■□□□□ 0.65
SMC4-221ENST00000489573 MRPL28Q13084 256 aaKnown RBP19.1■□□□□ 0.65
SMC4-221ENST00000489573 HSPB2Q16082 182 aa19.1■□□□□ 0.65
SMC4-221ENST00000489573 SGCAQ16586 387 aa19.1■□□□□ 0.65
SMC4-221ENST00000489573 TSPO2Q5TGU0 170 aa19.1■□□□□ 0.65
SMC4-221ENST00000489573 DCXRQ7Z4W1 244 aa19.1■□□□□ 0.65
SMC4-221ENST00000489573 CISD2Q8N5K1 135 aaKnown RBP19.1■□□□□ 0.65
SMC4-221ENST00000489573 KDF1Q8NAX2 398 aaPredicted RBP19.1■□□□□ 0.65
SMC4-221ENST00000489573 HAVCR2Q8TDQ0 301 aa19.1■□□□□ 0.65
SMC4-221ENST00000489573 APH1AQ96BI3 265 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms