RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 GIG44P09565 113 aaPredicted RBP3.67□□□□□ -1.82
CCL20-204ENST00000489160 OR8U8P0C7N1 319 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 CALM1P0DP23 149 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 CALM2P0DP24 149 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 CALM3P0DP25 149 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 RPS15AP62244 130 aaKnown RBP3.67□□□□□ -1.82
CCL20-204ENST00000489160 SELENOTP62341 195 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 STX3Q13277 289 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 PGGHGQ32M88 737 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 TRMT5Q32P41 509 aaKnown RBP3.67□□□□□ -1.82
CCL20-204ENST00000489160 TPRG1LQ5T0D9 272 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 GPRC6AQ5T6X5 926 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 COPS6Q7L5N1 327 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 LHFPL3Q86UP9 236 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 SPAG16Q8N0X2 631 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 LINC00469Q8N7U9 141 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 PRELID2Q8N945 189 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 ZNF557Q8N988 423 aaPredicted RBP3.67□□□□□ -1.82
CCL20-204ENST00000489160 SNX31Q8N9S9 440 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 OR10H4Q8NGA5 316 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 EEF1AKMT3Q96AZ1 226 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 MED8Q96G25 268 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 HIST1H4GQ99525 98 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 KLHDC3Q9BQ90 382 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 ACBD6Q9BR61 282 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 LLPHQ9BRT6 129 aaKnown RBP3.67□□□□□ -1.82
CCL20-204ENST00000489160 SELENOIQ9C0D9 397 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 DEFB129Q9H1M3 183 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 OR52A5Q9H2C5 316 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 CWH43Q9H720 699 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 KIR3DX1Q9H7L2 352 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 TP53TG3Q9ULZ0 132 aa3.67□□□□□ -1.82
CCL20-204ENST00000489160 MED1Q15648 1581 aaPredicted RBP3.67□□□□□ -1.82
CCL20-204ENST00000489160 A0A1B0GW55 424 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 A6NIZ1 184 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 K7ENP7 123 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 SLC9A3R1O14745 358 aaPredicted RBP3.66□□□□□ -1.82
CCL20-204ENST00000489160 TBL1XO60907 577 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 EIF3GO75821 320 aaKnown RBP eCLIP3.66□□□□□ -1.82
CCL20-204ENST00000489160 IGKV3-15P01624 115 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 HBE1P02100 147 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 DUX4L2P0CJ85 424 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 DUX4L3P0CJ86 424 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 DUX4L4P0CJ87 422 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 DUX4L5P0CJ88 424 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 DUX4L6P0CJ89 424 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 DUX4L7P0CJ90 424 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 ZNF250P15622 560 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 CMA1P23946 247 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 IL12BP29460 328 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 S100A5P33763 92 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 CSKP41240 450 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 GLP1RP43220 463 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 RGRP47804 291 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 RAP1BP61224 184 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 TWF1Q12792 350 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 PDIA2Q13087 525 aaKnown RBP3.66□□□□□ -1.82
CCL20-204ENST00000489160 GABRA6Q16445 453 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 C18orf21Q32NC0 220 aaPredicted RBP3.66□□□□□ -1.82
CCL20-204ENST00000489160 PAGE2BQ5JRK9 111 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 CNIH2Q6PI25 160 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 WDR74Q6RFH5 385 aaPredicted RBP3.66□□□□□ -1.82
CCL20-204ENST00000489160 DUX4L9Q6RFH8 374 aaPredicted RBP3.66□□□□□ -1.82
CCL20-204ENST00000489160 MBOAT1Q6ZNC8 495 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 ZNF621Q6ZSS3 439 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 OR2W3Q7Z3T1 314 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 ZNF546Q86UE3 836 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 VSIG2Q96IQ7 327 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 DNAJC1Q96KC8 554 aaKnown RBP3.66□□□□□ -1.82
CCL20-204ENST00000489160 NOL4LQ96MY1 436 aaPredicted RBP3.66□□□□□ -1.82
CCL20-204ENST00000489160 KIR2DL4Q99706 377 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 NAA50Q9GZZ1 169 aaKnown RBP3.66□□□□□ -1.82
CCL20-204ENST00000489160 ARMC7Q9H6L4 198 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 LY9Q9HBG7 655 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 PRR34Q9NV39 138 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 VNN3Q9NY84 501 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 DUX4Q9UBX2 424 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 GGA2Q9UJY4 613 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 FLVCR1Q9Y5Y0 555 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 PCF11O94913 1555 aaKnown RBP3.66□□□□□ -1.82
CCL20-204ENST00000489160 GAKO14976 1311 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 ADGRA3Q8IWK6 1321 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 IFT140Q96RY7 1462 aa3.66□□□□□ -1.82
CCL20-204ENST00000489160 PBRM1Q86U86 1689 aa3.65□□□□□ -1.82
CCL20-204ENST00000489160 HCFC1P51610 2035 aa3.65□□□□□ -1.82
CCL20-204ENST00000489160 IGLV8-61A0A075B6I0 122 aa3.65□□□□□ -1.83
CCL20-204ENST00000489160 IGLV3-22A0A075B6J6 115 aa3.65□□□□□ -1.83
CCL20-204ENST00000489160 A0A1B0GW15 77 aa3.65□□□□□ -1.83
CCL20-204ENST00000489160 CDX4O14627 284 aaPredicted RBP3.65□□□□□ -1.83
CCL20-204ENST00000489160 MPDU1O75352 247 aa3.65□□□□□ -1.83
CCL20-204ENST00000489160 HPGDP15428 266 aa3.65□□□□□ -1.83
CCL20-204ENST00000489160 NQO2P16083 231 aa3.65□□□□□ -1.83
CCL20-204ENST00000489160 CTRB1P17538 263 aa3.65□□□□□ -1.83
CCL20-204ENST00000489160 ZP3P21754 424 aa3.65□□□□□ -1.83
CCL20-204ENST00000489160 CXCR2P25025 360 aa3.65□□□□□ -1.83
CCL20-204ENST00000489160 HTR2CP28335 458 aa3.65□□□□□ -1.83
CCL20-204ENST00000489160 OR1E1P30953 314 aa3.65□□□□□ -1.83
CCL20-204ENST00000489160 UGT1A3P35503 534 aa3.65□□□□□ -1.83
CCL20-204ENST00000489160 ARR3P36575 388 aa3.65□□□□□ -1.83
CCL20-204ENST00000489160 RFC3P40938 356 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms